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Viral evolution

The Roles of Standing Genetic Variation and Evolutionary History in Determining the Evolvability of Anti-Predator Strategies

Daniel R. O'Donnell, Abhijna Parigi, Jordan A. Fish, Ian Dworkin, Aaron P. Wagner

published 23 Jun 2014

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High-Accuracy Identification of Incident HIV-1 Infections Using a Sequence Clustering Based Diversity Measure

Xia-Yu Xia, Meng Ge, Jenny H. Hsi, Xiang He, Yu-Hua Ruan, Zhi-Xin Wang, Yi-Ming Shao, Xian-Ming Pan

published 12 Jun 2014

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Limited Evolution of Inferred HIV-1 Tropism while Viremia Is Undetectable during Standard HAART Therapy

Guinevere Q. Lee, Winnie Dong, Theresa Mo, David J. H. F. Knapp, Chanson J. Brumme, Conan K. Woods, Steve Kanters, Benita Yip, P. Richard Harrigan

published 06 Jun 2014

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HIV-1 Subtype A Gag Variability and Epitope Evolution

Syed Hani Abidi, Marcia L. Kalish, Farhat Abbas, Sarah Rowland-Jones, Syed Ali

published 03 Jun 2014

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Whole-Genome Analysis of a Rare Human Korean G3P[9] Rotavirus Strain Suggests a Complex Evolutionary Origin Potentially Involving Reassortment Events between Feline and Bovine Rotaviruses

Sunyoung Jeong, Van Thai Than, Inseok Lim, Wonyong Kim

published 12 May 2014

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Evolution of Tertiary Structure of Viral RNA Dependent Polymerases

Jiří Černý, Barbora Černá Bolfíková, James J. Valdés, Libor Grubhoffer, Daniel Růžek

published 09 May 2014

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Estimating the Timing of Mother-to-Child Transmission of the Human Immunodeficiency Virus Type 1 Using a Viral Molecular Evolution Model

Antoine Chaillon, Tanawan Samleerat, Faustine Zoveda, Sébastien Ballesteros, Alain Moreau, Nicole Ngo-Giang-Huong, Gonzague Jourdain, Sara Gianella, Marc Lallemant, Frantz Depaulis, Francis Barin

published 09 Apr 2014

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The Evolution of Vp1 Gene in Enterovirus C Species Sub-Group That Contains Types CVA-21, CVA-24, EV-C95, EV-C96 and EV-C99

Teemu Smura, Soile Blomqvist, Tytti Vuorinen, Olga Ivanova, Elena Samoilovich, Haider Al-Hello, Carita Savolainen-Kopra, Tapani Hovi, Merja Roivainen

published 02 Apr 2014

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A New Species of Mesonivirus from the Northern Territory, Australia

David Warrilow, Daniel Watterson, Roy A. Hall, Steven S. Davis, Richard Weir, Nina Kurucz, Peter Whelan, Richard Allcock, Sonja Hall-Mendelin, Caitlin A. O’Brien, Jody Hobson-Peters

published 26 Mar 2014

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North Atlantic Migratory Bird Flyways Provide Routes for Intercontinental Movement of Avian Influenza Viruses

Robert J. Dusek, Gunnar T. Hallgrimsson, Hon S. Ip, Jón E. Jónsson, Srinand Sreevatsan, Sean W. Nashold, Joshua L. TeSlaa, Shinichiro Enomoto, Rebecca A. Halpin, Xudong Lin, Nadia Fedorova, Timothy B. Stockwell, Vivien G. Dugan, David E. Wentworth, Jeffrey S. Hall

published 19 Mar 2014

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Prediction of Steps in the Evolution of Variola Virus Host Range

Chad Smithson, Alex Purdy, Adrian J. Verster, Chris Upton

published 13 Mar 2014

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Molecular Comparison and Evolutionary Analyses of VP1 Nucleotide Sequences of New African Human Enterovirus 71 Isolates Reveal a Wide Genetic Diversity

Maël Bessaud, Richter Razafindratsimandresy, Antoine Nougairède, Marie-Line Joffret, Jagadish M. Deshpande, Audrey Dubot-Pérès, Jean-Michel Héraud, Xavier de Lamballerie, Francis Delpeyroux, Jean-Luc Bailly

published 05 Mar 2014

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Realistic Three Dimensional Fitness Landscapes Generated by Self Organizing Maps for the Analysis of Experimental HIV-1 Evolution

Ramón Lorenzo-Redondo, Soledad Delgado, Federico Morán, Cecilio Lopez-Galindez

published 28 Feb 2014

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