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Viral evolution

Chasing the Origin of Viruses: Capsid-Forming Genes as a Life-Saving Preadaptation within a Community of Early Replicators

Matti Jalasvuori, Sari Mattila, Ville Hoikkala

Computational Characterization of Transient Strain-Transcending Immunity against Influenza A

David C. Farrow, Donald S. Burke, Roni Rosenfeld

Adaptive Evolution of Toll-Like Receptors (TLRs) in the Family Suidae

Kwame A. Darfour-Oduro, Hendrik-Jan Megens, [ ... ], Lawrence B. Schook

Natural Selection Causes Adaptive Genetic Resistance in Wild Emmer Wheat against Powdery Mildew at “Evolution Canyon” Microsite, Mt. Carmel, Israel

Huayan Yin, Yuval Ben-Abu, [ ... ], Lingrang Kong

Time-Calibrated Phylogenomics of the Classical Swine Fever Viruses: Genome-Wide Bayesian Coalescent Approach

Taehyung Kwon, Sook Hee Yoon, [ ... ], Heebal Kim

Rapid and Liquid-Based Selection of Genetic Switches Using Nucleoside Kinase Fused with Aminoglycoside Phosphotransferase

Masahiro Tominaga, Kohei Ike, [ ... ], Daisuke Umeno

High Frequency of Transmitted HIV-1 Gag HLA Class I-Driven Immune Escape Variants but Minimal Immune Selection over the First Year of Clade C Infection

Kamini Gounder, Nagavelli Padayachi, [ ... ], Thumbi Ndung’u

New Insights into Flavivirus Evolution, Taxonomy and Biogeographic History, Extended by Analysis of Canonical and Alternative Coding Sequences

Gregory Moureau, Shelley Cook, [ ... ], Xavier de Lamballerie

Evidence That the Heterogeneity of a T4 Population Is the Result of Heritable Traits

Zachary J. Storms, Dominic Sauvageau

In Vitro Evolution and Affinity-Maturation with Coliphage Qβ Display

Claudia Skamel, Stephen G. Aller, Alain Bopda Waffo

Clinical Application of Estimating Hepatitis B Virus Quasispecies Complexity by Massive Sequencing: Correlation between Natural Evolution and On-Treatment Evolution

Maria Homs, Andrea Caballero, [ ... ], Francisco Rodriguez-Frias

Systematic CpT (ApG) Depletion and CpG Excess Are Unique Genomic Signatures of Large DNA Viruses Infecting Invertebrates

Mohita Upadhyay, Neha Sharma, Perumal Vivekanandan

CD8 and CD4 Epitope Predictions in RV144: No Strong Evidence of a T-Cell Driven Sieve Effect in HIV-1 Breakthrough Sequences from Trial Participants

Kalpana Dommaraju, Gustavo Kijak, [ ... ], Morgane Rolland

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