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Text mining

Named Entity Recognition for Bacterial Type IV Secretion Systems

Sophia Ananiadou, Dan Sullivan, William Black, Gina-Anne Levow, Joseph J. Gillespie, Chunhong Mao, Sampo Pyysalo, BalaKrishna Kolluru, Junichi Tsujii, Bruno Sobral

published 29 Mar 2011

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Bioinformatics-Driven Identification and Examination of Candidate Genes for Non-Alcoholic Fatty Liver Disease

Karina Banasik, Johanne M. Justesen, Malene Hornbak, Nikolaj T. Krarup, Anette P. Gjesing, Camilla H. Sandholt, Thomas S. Jensen, Niels Grarup, Åsa Andersson, Torben Jørgensen, Daniel R. Witte, Annelli Sandbæk, Torsten Lauritzen, Bernard Thorens, Søren Brunak, Thorkild I. A. Sørensen, Oluf Pedersen, Torben Hansen

published 27 Jan 2011

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FragKB: Structural and Literature Annotation Resource of Conserved Peptide Fragments and Residues

Ashish V. Tendulkar, Martin Krallinger, Victor de la Torre, Gonzalo López, Pramod P. Wangikar, Alfonso Valencia

published 18 Mar 2010

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Zsyntax: A Formal Language for Molecular Biology with Projected Applications in Text Mining and Biological Prediction

Giovanni Boniolo, Marcello D'Agostino, Pier Paolo Di Fiore

published 03 Mar 2010

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Novel Protein-Protein Interactions Inferred from Literature Context

Herman H. H. B. M. van Haagen, Peter A. C. 't Hoen, Alessandro Botelho Bovo, Antoine de Morrée, Erik M. van Mulligen, Christine Chichester, Jan A. Kors, Johan T. den Dunnen, Gert-Jan B. van Ommen, Silvère M. van der Maarel, Vinícius Medina Kern, Barend Mons, Martijn J. Schuemie

published 18 Nov 2009

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Large Scale Application of Neural Network Based Semantic Role Labeling for Automated Relation Extraction from Biomedical Texts

Thorsten Barnickel, Jason Weston, Ronan Collobert, Hans-Werner Mewes, Volker Stümpflen

published 28 Jul 2009

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Large-Scale Assessment of the Effect of Popularity on the Reliability of Research

Thomas Pfeiffer, Robert Hoffmann

published 24 Jun 2009

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PPI Finder: A Mining Tool for Human Protein-Protein Interactions

Min He, Yi Wang, Wei Li

published 23 Feb 2009

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Nominalization and Alternations in Biomedical Language

K. Bretonnel Cohen, Martha Palmer, Lawrence Hunter

published 09 Sep 2008

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