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Structural proteins

Interaction between β-lactoglobulin and EGCG under high-pressure by molecular dynamics simulation

Yechuan Huang, Xicai Zhang, Huayi Suo

published 21 Dec 2021

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The first report of porcine parvovirus 7 (PPV7) in Colombia demonstrates the presence of variants associated with modifications at the level of the VP2-capsid protein

Diana S. Vargas-Bermudez, Santiago Rendon-Marin, Julian Ruiz-Saenz, Dario Mogollón, Jairo Jaime

published 16 Dec 2021

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Immunoinformatics mapping of potential epitopes in SARS-CoV-2 structural proteins

Yengkhom Damayanti Devi, Himanshu Ballav Goswami, Sushmita Konwar, Chandrima Doley, Anutee Dolley, Arpita Devi, Chen Chongtham, Dikshita Dowerah, Vashkar Biswa, Latonglila Jamir, Aditya Kumar, Siddhartha Shankar Satapathy, Suvendra Kumar Ray, Ramesh Chandra Deka, Robin Doley, Manabendra Mandal, Sandeep Das, Chongtham Shyamsunder Singh, Partha Pratim Borah, Pabitra Nath, Nima D. Namsa

published 15 Nov 2021

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Protein conformational transitions explored by a morphing approach based on normal mode analysis in internal coordinates

Byung Ho Lee, Soon Woo Park, Soojin Jo, Moon Ki Kim

published 04 Nov 2021

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Validation of conventional PCR-like alternative to SARS-CoV-2 detection with target nucleocapsid protein gene in naso-oropharyngeal samples

Rogério Fernandes Carvalho, Monike da Silva Oliveira, Juliane Ribeiro, Isac Gabriel Cunha dos Santos, Katyane de Sousa Almeida, Ana Carolina Muller Conti, Bruna Alexandrino, Fabrício Souza Campos, Célia Maria de Almeida Soares, José Carlos Ribeiro Júnior

published 23 Sep 2021

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A secondary structure-based position-specific scoring matrix applied to the improvement in protein secondary structure prediction

Teng-Ruei Chen, Sheng-Hung Juan, Yu-Wei Huang, Yen-Cheng Lin, Wei-Cheng Lo

published 28 Jul 2021

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Immunoinformatics and molecular dynamics approaches: Next generation vaccine design against West Nile virus

Md Tahsin Khan, Rahatul Islam, Tarhima Jahan Jerin, Araf Mahmud, Sahara Khatun, Ahasanul Kobir, Md Nahidul Islam, Arzuba Akter, Shakhinur Islam Mondal

published 17 Jun 2021

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Structural coordinates: A novel approach to predict protein backbone conformation

Vladislava Milchevskaya, Alexei M. Nikitin, Sergey A. Lukshin, Ivan V. Filatov, Yuri V. Kravatsky, Vladimir G. Tumanyan, Natalia G. Esipova, Yury V. Milchevskiy

published 20 May 2021

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Isolation of the Buchnera aphidicola flagellum basal body complexes from the Buchnera membrane

Matthew J. Schepers, James N. Yelland, Nancy A. Moran, David W. Taylor

published 10 May 2021

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A mathematical representation of protein binding sites using structural dispersion of atoms from principal axes for classification of binding ligands

Galkande Iresha Premarathna, Leif Ellingson

published 08 Apr 2021

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A protein structural study based on the centrality analysis of protein sequence feature networks

Xiaogeng Wan, Xinying Tan

published 29 Mar 2021

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OCLSTM: Optimized convolutional and long short-term memory neural network model for protein secondary structure prediction

Yawu Zhao, Yihui Liu

published 03 Feb 2021

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A comparison between internal protein nanoenvironments of α-helices and β-sheets

Ivan Mazoni, Jose Augusto Salim, Fabio Rogerio de Moraes, Luiz Borro, Goran Neshich

published 30 Dec 2020

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