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Structural proteins

Revisiting the Myths of Protein Interior: Studying Proteins with Mass-Fractal Hydrophobicity-Fractal and Polarizability-Fractal Dimensions

Anirban Banerji, Indira Ghosh

published 16 Oct 2009

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Barrier-to-Autointegration Factor Proteome Reveals Chromatin-Regulatory Partners

Rocío Montes de Oca, Christopher J. Shoemaker, Marjan Gucek, Robert N. Cole, Katherine L. Wilson

published 16 Sep 2009

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Coupling between Properties of the Protein Shape and the Rate of Protein Folding

Dmitry N. Ivankov, Natalya S. Bogatyreva, Michail Yu Lobanov, Oxana V. Galzitskaya

published 03 Aug 2009

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A Comprehensive Analysis of the Structure-Function Relationship in Proteins Based on Local Structure Similarity

Torgeir R. Hvidsten, Astrid Lægreid, Andriy Kryshtafovych, Gunnar Andersson, Krzysztof Fidelis, Jan Komorowski

published 15 Jul 2009

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Are Protein Domains Modules of Lateral Genetic Transfer?

Cheong Xin Chan, Aaron E. Darling, Robert G. Beiko, Mark A. Ragan

published 20 Feb 2009

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Recognition of Interaction Interface Residues in Low-Resolution Structures of Protein Assemblies Solely from the Positions of Cα Atoms

Rupali A. Gadkari, Deepthi Varughese, N. Srinivasan

published 13 Feb 2009

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Random Amino Acid Mutations and Protein Misfolding Lead to Shannon Limit in Sequence-Structure Communication

Andreas Martin Lisewski

published 01 Sep 2008

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Fibronectin Unfolding Revisited: Modeling Cell Traction-Mediated Unfolding of the Tenth Type-III Repeat

Elaine P. S. Gee, Donald E. Ingber, Collin M. Stultz

published 11 Jun 2008

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SP⁵: Improving Protein Fold Recognition by Using Torsion Angle Profiles and Profile-Based Gap Penalty Model

Wei Zhang, Song Liu, Yaoqi Zhou

published 04 Jun 2008

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Stylus: A System for Evolutionary Experimentation Based on a Protein/Proteome Model with Non-Arbitrary Functional Constraints

Douglas D. Axe, Brendan W. Dixon, Philip Lu

published 04 Jun 2008

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De-Orphaning the Structural Proteome through Reciprocal Comparison of Evolutionarily Important Structural Features

R. Matthew Ward, Serkan Erdin, Tuan A. Tran, David M. Kristensen, Andreas Martin Lisewski, Olivier Lichtarge

published 07 May 2008

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Structural Insights into the Evolution of a Non-Biological Protein: Importance of Surface Residues in Protein Fold Optimization

Matthew D. Smith, Matthew A. Rosenow, Meitian Wang, James P. Allen, Jack W. Szostak, John C. Chaput

published 23 May 2007

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Efficient Identification of Critical Residues Based Only on Protein Structure by Network Analysis

Michael P. Cusack, Boris Thibert, Dale E. Bredesen, Gabriel del Rio

published 09 May 2007

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