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Split-decomposition method

A Coevolutionary Residue Network at the Site of a Functionally Important Conformational Change in a Phosphohexomutase Enzyme Family

Yingying Lee, Jacob Mick, Cristina Furdui, Lesa J. Beamer

published 07 Jun 2012

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DNA Barcoding the Native Flowering Plants and Conifers of Wales

Natasha de Vere, Tim C. G. Rich, Col R. Ford, Sarah A. Trinder, Charlotte Long, Chris W. Moore, Danielle Satterthwaite, Helena Davies, Joel Allainguillaume, Sandra Ronca, Tatiana Tatarinova, Hannah Garbett, Kevin Walker, Mike J. Wilkinson

published 06 Jun 2012

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Developing and Applying Heterogeneous Phylogenetic Models with XRate

Oscar Westesson, Ian Holmes

published 05 Jun 2012

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The YARHG Domain: An Extracellular Domain in Search of a Function

Penny Coggill, Alex Bateman

published 17 May 2012

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Integrated Analysis of Residue Coevolution and Protein Structure in ABC Transporters

Attila Gulyás-Kovács

published 08 May 2012

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Accurate Reconstruction of Insertion-Deletion Histories by Statistical Phylogenetics

Oscar Westesson, Gerton Lunter, Benedict Paten, Ian Holmes

published 20 Apr 2012

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PHYRN: A Robust Method for Phylogenetic Analysis of Highly Divergent Sequences

Gaurav Bhardwaj, Kyung Dae Ko, Yoojin Hong, Zhenhai Zhang, Ngai Lam Ho, Sree V. Chintapalli, Lindsay A. Kline, Matthew Gotlin, David Nicholas Hartranft, Morgen E. Patterson, Foram Dave, Evan J. Smith, Edward C. Holmes, Randen L. Patterson, Damian B. van Rossum

published 13 Apr 2012

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Expression of NADPH Oxidase (NOX) 5 in Rabbit Corneal Stromal Cells

Farhan Rizvi, Tom Heimann, William J. O'Brien

published 12 Apr 2012

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Alignment-Free Design of Highly Discriminatory Diagnostic Primer Sets for Escherichia coli O104:H4 Outbreak Strains

Leighton Pritchard, Nicola J. Holden, Martina Bielaszewska, Helge Karch, Ian K. Toth

published 05 Apr 2012

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Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

David A. Hysom, Pejman Naraghi-Arani, Maher Elsheikh, A. Celena Carrillo, Peter L. Williams, Shea N. Gardner

published 02 Apr 2012

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Treelength Optimization for Phylogeny Estimation

Kevin Liu, Tandy Warnow

published 19 Mar 2012

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Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

Alexander Kawrykow, Gary Roumanis, Alfred Kam, Daniel Kwak, Clarence Leung, Chu Wu, Eleyine Zarour, Phylo players , Luis Sarmenta, Mathieu Blanchette, Jérôme Waldispühl

published 07 Mar 2012

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Detecting Remote Sequence Homology in Disordered Proteins: Discovery of Conserved Motifs in the N-Termini of Mononegavirales phosphoproteins

David Karlin, Robert Belshaw

published 05 Mar 2012

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