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Split-decomposition method

The YARHG Domain: An Extracellular Domain in Search of a Function

Penny Coggill, Alex Bateman

Integrated Analysis of Residue Coevolution and Protein Structure in ABC Transporters

Attila Gulyás-Kovács

Accurate Reconstruction of Insertion-Deletion Histories by Statistical Phylogenetics

Oscar Westesson, Gerton Lunter, Benedict Paten, Ian Holmes

PHYRN: A Robust Method for Phylogenetic Analysis of Highly Divergent Sequences

Gaurav Bhardwaj, Kyung Dae Ko, [ ... ], Damian B. van Rossum

Expression of NADPH Oxidase (NOX) 5 in Rabbit Corneal Stromal Cells

Farhan Rizvi, Tom Heimann, William J. O'Brien

Alignment-Free Design of Highly Discriminatory Diagnostic Primer Sets for Escherichia coli O104:H4 Outbreak Strains

Leighton Pritchard, Nicola J. Holden, [ ... ], Ian K. Toth

Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

David A. Hysom, Pejman Naraghi-Arani, [ ... ], Shea N. Gardner

Treelength Optimization for Phylogeny Estimation

Kevin Liu, Tandy Warnow

Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

Alexander Kawrykow, Gary Roumanis, [ ... ], Jérôme Waldispühl

Detecting Remote Sequence Homology in Disordered Proteins: Discovery of Conserved Motifs in the N-Termini of Mononegavirales phosphoproteins

David Karlin, Robert Belshaw

Diversity Measures in Environmental Sequences Are Highly Dependent on Alignment Quality—Data from ITS and New LSU Primers Targeting Basidiomycetes

Dirk Krüger, Danuta Kapturska, [ ... ], Tesfaye Wubet

Exploiting Gene Families for Phylogenomic Analysis of Myzostomid Transcriptome Data

Stefanie Hartmann, Conrad Helm, [ ... ], Christoph Bleidorn

Accounting For Alignment Uncertainty in Phylogenomics

Martin Wu, Sourav Chatterji, Jonathan A. Eisen

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