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Software tools

tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics

Alexander D. Becker, Bryan T. Grenfell

Network Meta-Analysis Using R: A Review of Currently Available Automated Packages

Binod Neupane, Danielle Richer, [ ... ], Joseph Beyene

Measuring the Distribution of Spitefulness

Erik O. Kimbrough, J. Philipp Reiss

These Are Not the K-mers You Are Looking For: Efficient Online K-mer Counting Using a Probabilistic Data Structure

Qingpeng Zhang, Jason Pell, [ ... ], C. Titus Brown

The GBIF Integrated Publishing Toolkit: Facilitating the Efficient Publishing of Biodiversity Data on the Internet

Tim Robertson, Markus Döring, [ ... ], Peter Desmet

The Parallel Worm Tracker: A Platform for Measuring Average Speed and Drug-Induced Paralysis in Nematodes

Daniel Ramot, Brandon E. Johnson, [ ... ], Miriam B. Goodman

Open Source Tracking and Analysis of Adult Drosophila Locomotion in Buridan's Paradigm with and without Visual Targets

Julien Colomb, Lutz Reiter, [ ... ], Bjoern Brembs

BEEtag: A Low-Cost, Image-Based Tracking System for the Study of Animal Behavior and Locomotion

James D. Crall, Nick Gravish, Andrew M. Mountcastle, Stacey A. Combes

The Connectome Mapper: An Open-Source Processing Pipeline to Map Connectomes with MRI

Alessandro Daducci, Stephan Gerhard, [ ... ], Jean-Philippe Thiran

Comparative analysis of novel MGISEQ-2000 sequencing platform vs Illumina HiSeq 2500 for whole-genome sequencing

Dmitriy Korostin, Nikolay Kulemin, [ ... ], Alexey Gorbachev

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data

Xiaohong Li, Guy N. Brock, [ ... ], Shesh N. Rai

Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome

Daniel Garijo, Sarah Kinnings, [ ... ], Yolanda Gil

Exact Power and Sample Size Calculations for the Two One-Sided Tests of Equivalence

Gwowen Shieh

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