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Software tools

Novel R Pipeline for Analyzing Biolog Phenotypic Microarray Data

Minna Vehkala, Mikhail Shubin, [ ... ], Jukka Corander

Rarity-Weighted Richness: A Simple and Reliable Alternative to Integer Programming and Heuristic Algorithms for Minimum Set and Maximum Coverage Problems in Conservation Planning

Fabio Albuquerque, Paul Beier

Identification of a Novel Reference Gene for Apple Transcriptional Profiling under Postharvest Conditions

Tatiane Timm Storch, Camila Pegoraro, [ ... ], César Luis Girardi

Identification of Suitable Reference Genes for Gene Expression Studies in Tendons from Patients with Rotator Cuff Tear

Mariana Ferreira Leal, Paulo Santoro Belangero, [ ... ], Moises Cohen

CRISPR MultiTargeter: A Web Tool to Find Common and Unique CRISPR Single Guide RNA Targets in a Set of Similar Sequences

Sergey V. Prykhozhij, Vinothkumar Rajan, Daniel Gaston, Jason N. Berman

Color-Shape Associations Revealed with Implicit Association Tests

Na Chen, Kanji Tanaka, Katsumi Watanabe

A Note on an Exon-Based Strategy to Identify Differentially Expressed Genes in RNA-Seq Experiments

Asta Laiho, Laura L. Elo

Network Meta-Analysis Using R: A Review of Currently Available Automated Packages

Binod Neupane, Danielle Richer, [ ... ], Joseph Beyene

GLIMMPSE Lite: Calculating Power and Sample Size on Smartphone Devices

Aarti Munjal, Uttara R. Sakhadeo, [ ... ], Sarah M. Kreidler

Optimized Brain Extraction for Pathological Brains (optiBET)

Evan S. Lutkenhoff, Matthew Rosenberg, [ ... ], Martin M. Monti

Calculation and Visualization of Atomistic Mechanical Stresses in Nanomaterials and Biomolecules

Andrew T. Fenley, Hari S. Muddana, Michael K. Gilson

Using ROC Curves to Choose Minimally Important Change Thresholds when Sensitivity and Specificity Are Valued Equally: The Forgotten Lesson of Pythagoras. Theoretical Considerations and an Example Application of Change in Health Status

Robert Froud, Gary Abel

The Connectome Visualization Utility: Software for Visualization of Human Brain Networks

Roan A. LaPlante, Linda Douw, Wei Tang, Steven M. Stufflebeam

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