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Software tools

Family-Based Benchmarking of Copy Number Variation Detection Software

Marcel Elie Nutsua, Annegret Fischer, Almut Nebel, Sylvia Hofmann, Stefan Schreiber, Michael Krawczak, Michael Nothnagel

published 21 Jul 2015

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Identification of Suitable Reference Genes for Investigating Gene Expression in Anterior Cruciate Ligament Injury by Using Reverse Transcription-Quantitative PCR

Mariana Ferreira Leal, Diego Costa Astur, Pedro Debieux, Gustavo Gonçalves Arliani, Carlos Eduardo Silveira Franciozi, Leonor Casilla Loyola, Carlos Vicente Andreoli, Marília Cardoso Smith, Alberto de Castro Pochini, Benno Ejnisman, Moises Cohen

published 20 Jul 2015

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pvsR: An Open Source Interface to Big Data on the American Political Sphere

Ulrich Matter, Alois Stutzer

published 01 Jul 2015

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A Modified Particle Swarm Optimization Technique for Finding Optimal Designs for Mixture Models

Weng Kee Wong, Ray-Bing Chen, Chien-Chih Huang, Weichung Wang

published 19 Jun 2015

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Bioinformatic Amplicon Read Processing Strategies Strongly Affect Eukaryotic Diversity and the Taxonomic Composition of Communities

Markus Majaneva, Kirsi Hyytiäinen, Sirkka Liisa Varvio, Satoshi Nagai, Jaanika Blomster

published 05 Jun 2015

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SDMdata: A Web-Based Software Tool for Collecting Species Occurrence Records

Xiaoquan Kong, Minyi Huang, Renyan Duan

published 01 Jun 2015

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The Dilemma of Heterogeneity Tests in Meta-Analysis: A Challenge from a Simulation Study

Shi-jun Li, Hua Jiang, Hao Yang, Wei Chen, Jin Peng, Ming-wei Sun, Charles Damien Lu, Xi Peng, Jun Zeng

published 29 May 2015

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Do We Feel the Same Empathy for Loved and Hated Peers?

Giulia Bucchioni, Thierry Lelard, Said Ahmaidi, Olivier Godefroy, Pierre Krystkowiak, Harold Mouras

published 29 May 2015

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Visinets: A Web-Based Pathway Modeling and Dynamic Visualization Tool

Jozef Spychala, Pawel Spychala, Shawn Gomez, Gabriel E. Weinreb

published 28 May 2015

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Accurate, Fully-Automated NMR Spectral Profiling for Metabolomics

Siamak Ravanbakhsh, Philip Liu, Trent C. Bjordahl, Rupasri Mandal, Jason R. Grant, Michael Wilson, Roman Eisner, Igor Sinelnikov, Xiaoyu Hu, Claudio Luchinat, Russell Greiner, David S. Wishart

published 27 May 2015

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Robust and Reproducible Quantification of the Extent of Chest Radiographic Abnormalities (And It’s Free!)

Ana Requena-Méndez, Edelweiss Aldasoro, Jose Muñoz, David A. J. Moore

published 21 May 2015

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Engineering D-Amino Acid Containing Collagen Like Peptide at the Cleavage Site of Clostridium histolyticum Collagenase for Its Inhibition

Punitha Velmurugan, Raghava Rao Jonnalagadda, Balachandran Unni Nair

published 14 May 2015

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Effect of User Charges on Secondary Level Surgical Care Utilization and Out-of-Pocket Expenditures in Haryana State, India

Deepak Balasubramanian, Shankar Prinja, Arun Kumar Aggarwal

published 04 May 2015

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