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Software tools

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data

Xiaohong Li, Guy N. Brock, Eric C. Rouchka, Nigel G. F. Cooper, Dongfeng Wu, Timothy E. O’Toole, Ryan S. Gill, Abdallah M. Eteleeb, Liz O’Brien, Shesh N. Rai

published 01 May 2017

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phylo-node: A molecular phylogenetic toolkit using Node.js

Damien M. O’Halloran

published 14 Apr 2017

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Assessing the uptake of persistent identifiers by research infrastructure users

Matthew S. Mayernik, Keith E. Maull

published 10 Apr 2017

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Tablet computer enhanced training improves internal medicine exam performance

Daniel C. Baumgart, Ilja Wende, Ulrike Grittner

published 03 Apr 2017

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Interactive reconstructions of cranial 3D implants under MeVisLab as an alternative to commercial planning software

Jan Egger, Markus Gall, Alois Tax, Muammer Ücal, Ulrike Zefferer, Xing Li, Gord von Campe, Ute Schäfer, Dieter Schmalstieg, Xiaojun Chen

published 06 Mar 2017

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A Software Tool for Estimation of Burden of Infectious Diseases in Europe Using Incidence-Based Disability Adjusted Life Years

Edoardo Colzani, Alessandro Cassini, Daniel Lewandowski, Marie-Josee J. Mangen, Dietrich Plass, Scott A. McDonald, Alies van Lier, Juanita A. Haagsma, Guido Maringhini, Alessandro Pini, Piotr Kramarz, Mirjam E. Kretzschmar

published 20 Jan 2017

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Selection and Validation of Reference Genes for Gene Expression Analysis in Vigna angularis Using Quantitative Real-Time RT-PCR

Chao Chi, Yongqiang Shen, Lihua Yin, Xiwang Ke, Dong Han, Yuhu Zuo

published 16 Dec 2016

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GWRM: An R Package for Identifying Sources of Variation in Overdispersed Count Data

Silverio Vílchez-López, Antonio José Sáez-Castillo, María José Olmo-Jiménez

published 09 Dec 2016

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Feasibility of Quantification of Intracranial Aneurysm Pulsation with 4D CTA with Manual and Computer-Aided Post-Processing

Till Illies, Dennis Saering, Manabu Kinoshita, Toshiyuki Fujinaka, Maxim Bester, Jens Fiehler, Noriyuki Tomiyama, Yoshiyuki Watanabe

published 23 Nov 2016

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Glioblastoma Segmentation: Comparison of Three Different Software Packages

Even Hovig Fyllingen, Anne Line Stensjøen, Erik Magnus Berntsen, Ole Solheim, Ingerid Reinertsen

published 25 Oct 2016

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ODMSummary: A Tool for Automatic Structured Comparison of Multiple Medical Forms Based on Semantic Annotation with the Unified Medical Language System

Michael Storck, Rainer Krumm, Martin Dugas

published 13 Oct 2016

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hemaClass.org: Online One-By-One Microarray Normalization and Classification of Hematological Cancers for Precision Medicine

Steffen Falgreen, Anders Ellern Bilgrau, Rasmus Froberg Brøndum, Lasse Hjort Jakobsen, Jonas Have, Kasper Lindblad Nielsen, Tarec Christoffer El-Galaly, Julie Støve Bødker, Alexander Schmitz, Ken H. Young, Hans Erik Johnsen, Karen Dybkær, Martin Bøgsted

published 04 Oct 2016

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Image-Based Single Cell Profiling: High-Throughput Processing of Mother Machine Experiments

Christian Carsten Sachs, Alexander Grünberger, Stefan Helfrich, Christopher Probst, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh

published 23 Sep 2016

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