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Software tools

Singularity: Scientific containers for mobility of compute

Gregory M. Kurtzer, Vanessa Sochat, Michael W. Bauer

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data

Xiaohong Li, Guy N. Brock, [ ... ], Shesh N. Rai

phylo-node: A molecular phylogenetic toolkit using Node.js

Damien M. O’Halloran

Assessing the uptake of persistent identifiers by research infrastructure users

Matthew S. Mayernik, Keith E. Maull

Tablet computer enhanced training improves internal medicine exam performance

Daniel C. Baumgart, Ilja Wende, Ulrike Grittner

Interactive reconstructions of cranial 3D implants under MeVisLab as an alternative to commercial planning software

Jan Egger, Markus Gall, [ ... ], Xiaojun Chen

A Software Tool for Estimation of Burden of Infectious Diseases in Europe Using Incidence-Based Disability Adjusted Life Years

Edoardo Colzani, Alessandro Cassini, [ ... ], Mirjam E. Kretzschmar

Selection and Validation of Reference Genes for Gene Expression Analysis in Vigna angularis Using Quantitative Real-Time RT-PCR

Chao Chi, Yongqiang Shen, [ ... ], Yuhu Zuo

GWRM: An R Package for Identifying Sources of Variation in Overdispersed Count Data

Silverio Vílchez-López, Antonio José Sáez-Castillo, María José Olmo-Jiménez

Feasibility of Quantification of Intracranial Aneurysm Pulsation with 4D CTA with Manual and Computer-Aided Post-Processing

Till Illies, Dennis Saering, [ ... ], Yoshiyuki Watanabe

Glioblastoma Segmentation: Comparison of Three Different Software Packages

Even Hovig Fyllingen, Anne Line Stensjøen, [ ... ], Ingerid Reinertsen

ODMSummary: A Tool for Automatic Structured Comparison of Multiple Medical Forms Based on Semantic Annotation with the Unified Medical Language System

Michael Storck, Rainer Krumm, Martin Dugas

hemaClass.org: Online One-By-One Microarray Normalization and Classification of Hematological Cancers for Precision Medicine

Steffen Falgreen, Anders Ellern Bilgrau, [ ... ], Martin Bøgsted

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