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Software tools

Fitting item response unfolding models to Likert-scale data using mirt in R

Chen-Wei Liu, R. Philip Chalmers

published 03 May 2018

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R software package based statistical optimization of process components to simultaneously enhance the bacterial growth, laccase production and textile dye decolorization with cytotoxicity study

Sunil Bhavsar, Pravin Dudhagara, Shantilal Tank

published 02 May 2018

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SeedVicious: Analysis of microRNA target and near-target sites

Antonio Marco

published 17 Apr 2018

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Retailer Stackelberg game in a supply chain with pricing and service decisions and simple price discount contract

Seyed Jafar Sadjadi, Hashem Asadi, Ramin Sadeghian, Hadi Sahebi

published 12 Apr 2018

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TeamWATCH: Visualizing development activities using a 3-D city metaphor to improve conflict detection and team awareness

En Ye, Xin Ye, Chang Liu

published 20 Mar 2018

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Rapid and easy detection of low-level resistance to vancomycin in methicillin-resistant Staphylococcus aureus by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

Kota Asakura, Takuya Azechi, Hiroshi Sasano, Hidehito Matsui, Hideaki Hanaki, Motoyasu Miyazaki, Tohru Takata, Miwa Sekine, Tomoiku Takaku, Tomonori Ochiai, Norio Komatsu, Keigo Shibayama, Yuki Katayama, Koji Yahara

published 09 Mar 2018

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ABrox—A user-friendly Python module for approximate Bayesian computation with a focus on model comparison

Ulf Kai Mertens, Andreas Voss, Stefan Radev

published 08 Mar 2018

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QCloud: A cloud-based quality control system for mass spectrometry-based proteomics laboratories

Cristina Chiva, Roger Olivella, Eva Borràs, Guadalupe Espadas, Olga Pastor, Amanda Solé, Eduard Sabidó

published 11 Jan 2018

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Why rate when you could compare? Using the “EloChoice” package to assess pairwise comparisons of perceived physical strength

Andrew P. Clark, Kate L. Howard, Andy T. Woods, Ian S. Penton-Voak, Christof Neumann

published 02 Jan 2018

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pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment

Sven Warris, N. Roshan N. Timal, Marcel Kempenaar, Arne M. Poortinga, Henri van de Geest, Ana L. Varbanescu, Jan-Peter Nap

published 02 Jan 2018

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Identification and evaluation of reference genes for qRT-PCR studies in Lentinula edodes

Quanju Xiang, Jin Li, Peng Qin, Maolan He, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Xiaoqiong Chen, Xianfu Zeng, Yunfu Gu

published 02 Jan 2018

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RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

published 21 Dec 2017

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Gbm.auto: A software tool to simplify spatial modelling and Marine Protected Area planning

Simon Dedman, Rick Officer, Maurice Clarke, David G. Reid, Deirdre Brophy

published 07 Dec 2017

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