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Software tools

Fitting item response unfolding models to Likert-scale data using mirt in R

Chen-Wei Liu, R. Philip Chalmers

R software package based statistical optimization of process components to simultaneously enhance the bacterial growth, laccase production and textile dye decolorization with cytotoxicity study

Sunil Bhavsar, Pravin Dudhagara, Shantilal Tank

SeedVicious: Analysis of microRNA target and near-target sites

Antonio Marco

Retailer Stackelberg game in a supply chain with pricing and service decisions and simple price discount contract

Seyed Jafar Sadjadi, Hashem Asadi, Ramin Sadeghian, Hadi Sahebi

TeamWATCH: Visualizing development activities using a 3-D city metaphor to improve conflict detection and team awareness

En Ye, Xin Ye, Chang Liu

Rapid and easy detection of low-level resistance to vancomycin in methicillin-resistant Staphylococcus aureus by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

Kota Asakura, Takuya Azechi, [ ... ], Koji Yahara

ABrox—A user-friendly Python module for approximate Bayesian computation with a focus on model comparison

Ulf Kai Mertens, Andreas Voss, Stefan Radev

QCloud: A cloud-based quality control system for mass spectrometry-based proteomics laboratories

Cristina Chiva, Roger Olivella, [ ... ], Eduard Sabidó

Why rate when you could compare? Using the “EloChoice” package to assess pairwise comparisons of perceived physical strength

Andrew P. Clark, Kate L. Howard, [ ... ], Christof Neumann

pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment

Sven Warris, N. Roshan N. Timal, [ ... ], Jan-Peter Nap

Identification and evaluation of reference genes for qRT-PCR studies in Lentinula edodes

Quanju Xiang, Jin Li, [ ... ], Yunfu Gu

RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

Gbm.auto: A software tool to simplify spatial modelling and Marine Protected Area planning

Simon Dedman, Rick Officer, [ ... ], Deirdre Brophy

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