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Software engineering

A Practical Simulation Method to Calculate Sample Size of Group Sequential Trials for Time-to-Event Data under Exponential and Weibull Distribution

Zhiwei Jiang, Ling Wang, Chanjuan Li, Jielai Xia, Hongxia Jia

published 05 Sep 2012

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Text Messaging to Improve Attendance at Post-Operative Clinic Visits after Adult Male Circumcision for HIV Prevention: A Randomized Controlled Trial

Thomas A. Odeny, Robert C. Bailey, Elizabeth A. Bukusi, Jane M. Simoni, Kenneth A. Tapia, Krista Yuhas, King K. Holmes, R. Scott McClelland

published 05 Sep 2012

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Evaluation of New Reference Genes in Papaya for Accurate Transcript Normalization under Different Experimental Conditions

Xiaoyang Zhu, Xueping Li, Weixin Chen, Jianye Chen, Wangjin Lu, Lei Chen, Danwen Fu

published 31 Aug 2012

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Human Immunodeficiency Virus Type-1 (HIV-1) Continues to Evolve in Presence of Broadly Neutralizing Antibodies More than Ten Years after Infection

Antoine Chaillon, Martine Braibant, Stéphane Hué, Samia Bencharif, David Enard, Alain Moreau, Assia Samri, Henri Agut, Francis Barin

published 30 Aug 2012

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Novel Direct Targets of miR-19a Identified in Breast Cancer Cells by a Quantitative Proteomic Approach

Mamoru Ouchida, Hirotaka Kanzaki, Sachio Ito, Hiroko Hanafusa, Yoshimi Jitsumori, Seiji Tamaru, Kenji Shimizu

published 30 Aug 2012

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Molecular Diagnosis of Usher Syndrome: Application of Two Different Next Generation Sequencing-Based Procedures

Danilo Licastro, Margherita Mutarelli, Ivana Peluso, Kornelia Neveling, Nienke Wieskamp, Rossella Rispoli, Diego Vozzi, Emmanouil Athanasakis, Angela D'Eustacchio, Mariateresa Pizzo, Francesca D'Amico, Carmela Ziviello, Francesca Simonelli, Antonella Fabretto, Hans Scheffer, Paolo Gasparini, Sandro Banfi, Vincenzo Nigro

published 29 Aug 2012

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CytoKavosh: A Cytoscape Plug-In for Finding Network Motifs in Large Biological Networks

Ali Masoudi-Nejad, Mitra Ansariola, Zahra Razaghi Moghadam Kashani, Ali Salehzadeh-Yazdi, Sahand Khakabimamaghani

published 29 Aug 2012

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Structures of Human DPP7 Reveal the Molecular Basis of Specific Inhibition and the Architectural Diversity of Proline-Specific Peptidases

Gustavo Arruda Bezerra, Elena Dobrovetsky, Aiping Dong, Almagul Seitova, Lissete Crombett, Lisa M. Shewchuk, Annie M. Hassell, Sharon M. Sweitzer, Thomas D. Sweitzer, Patrick J. McDevitt, Kyung O. Johanson, Karen M. Kennedy-Wilson, Doug Cossar, Alexey Bochkarev, Karl Gruber, Sirano Dhe-Paganon

published 29 Aug 2012

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GPU-FS-kNN: A Software Tool for Fast and Scalable kNN Computation Using GPUs

Ahmed Shamsul Arefin, Carlos Riveros, Regina Berretta, Pablo Moscato

published 28 Aug 2012

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Genetic Diversity and Population Structure of Indian Golden Silkmoth (Antheraea assama)

Kallare P. Arunkumar, Anup Kumar Sahu, Atish Ranjan Mohanty, Arvind K. Awasthi, Appukuttannair R. Pradeep, S. Raje Urs, Javaregowda Nagaraju

published 28 Aug 2012

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Conic Sampling: An Efficient Method for Solving Linear and Quadratic Programming by Randomly Linking Constraints within the Interior

Oliver Serang

published 27 Aug 2012

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Probing the Binding Sites of Antibiotic Drugs Doxorubicin and N-(trifluoroacetyl) Doxorubicin with Human and Bovine Serum Albumins

Daniel Agudelo, Philippe Bourassa, Julie Bruneau, Gervais Bérubé, Éric Asselin, Heidar-Ali Tajmir-Riahi

published 24 Aug 2012

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BSim: An Agent-Based Tool for Modeling Bacterial Populations in Systems and Synthetic Biology

Thomas E. Gorochowski, Antoni Matyjaszkiewicz, Thomas Todd, Neeraj Oak, Kira Kowalska, Stephen Reid, Krasimira T. Tsaneva-Atanasova, Nigel J. Savery, Claire S. Grierson, Mario di Bernardo

published 24 Aug 2012

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