Single nucleotide polymorphisms

De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties

Claudio Benicio Cardoso-Silva, Estela Araujo Costa, Melina Cristina Mancini, Thiago Willian Almeida Balsalobre, Lucas Eduardo Costa Canesin, Luciana Rossini Pinto, Monalisa Sampaio Carneiro, Antonio Augusto Franco Garcia, Anete Pereira de Souza, Renato Vicentini

published 11 Feb 2014

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Genome-Wide Association Analysis and Genomic Prediction of Mycobacterium avium Subspecies paratuberculosis Infection in US Jersey Cattle

Yalda Zare, George E. Shook, Michael T. Collins, Brian W. Kirkpatrick

published 11 Feb 2014

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A Genome-Wide “Pleiotropy Scan” Does Not Identify New Susceptibility Loci for Estrogen Receptor Negative Breast Cancer

Daniele Campa, Myrto Barrdahl, Konstantinos K. Tsilidis, Gianluca Severi, W. Ryan Diver, Afshan Siddiq, Stephen Chanock, Robert N. Hoover, Regina G. Ziegler, Christine D. Berg, Saundra S. Buys, Christopher A. Haiman, Brian E. Henderson, Fredrick R. Schumacher, Loïc Le Marchand, Dieter Flesch-Janys, Sara Lindström, David J. Hunter, Susan E. Hankinson, Walter C. Willett, Peter Kraft, David G. Cox, Kay-Tee Khaw, Anne Tjønneland, Laure Dossus, Dimitrios Trichopoulos, Salvatore Panico, Carla H. van Gils, Elisabete Weiderpass, Aurelio Barricarte, Malin Sund, Mia M. Gaudet, Graham Giles, Melissa Southey, Laura Baglietto, Jenny Chang-Claude, Rudolf Kaaks, Federico Canzian

published 11 Feb 2014

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Joint Effects of Known Type 2 Diabetes Susceptibility Loci in Genome-Wide Association Study of Singapore Chinese: The Singapore Chinese Health Study

Zhanghua Chen, Mark A. Pereira, Mark Seielstad, Woon-Puay Koh, E. Shyong Tai, Yik-Ying Teo, Jianjun Liu, Chris Hsu, Renwei Wang, Andrew O. Odegaard, Bharat Thyagarajan, Revati Koratkar, Jian-Min Yuan, Myron D. Gross, Daniel O. Stram

published 10 Feb 2014

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Integration of Sequence Data from a Consanguineous Family with Genetic Data from an Outbred Population Identifies PLB1 as a Candidate Rheumatoid Arthritis Risk Gene

Yukinori Okada, Dorothee Diogo, Jeffrey D. Greenberg, Faten Mouassess, Walid A. L. Achkar, Robert S. Fulton, Joshua C. Denny, Namrata Gupta, Daniel Mirel, Stacy Gabriel, Gang Li, Joel M. Kremer, Dimitrios A. Pappas, Robert J. Carroll, Anne E. Eyler, Gosia Trynka, Eli A. Stahl, Jing Cui, Richa Saxena, Marieke J. H. Coenen, Henk-Jan Guchelaar, Tom W. J. Huizinga, Philippe Dieudé, Xavier Mariette, Anne Barton, Helena Canhão, João E. Fonseca, Niek de Vries, Paul P. Tak, Larry W. Moreland, S. Louis Bridges Jr, Corinne Miceli-Richard, Hyon K. Choi, Yoichiro Kamatani, Pilar Galan, Mark Lathrop, Towfique Raj, Philip L. De Jager, Soumya Raychaudhuri, Jane Worthington, Leonid Padyukov, Lars Klareskog, Katherine A. Siminovitch, Peter K. Gregersen, Elaine R. Mardis, Thurayya Arayssi, Layla A. Kazkaz, Robert M. Plenge

published 10 Feb 2014

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Combined Genetic and High-Throughput Strategies for Molecular Diagnosis of Inherited Retinal Dystrophies

Marta de Castro-Miró, Esther Pomares, Laura Lorés-Motta, Raul Tonda, Joaquín Dopazo, Gemma Marfany, Roser Gonzàlez-Duarte

published 07 Feb 2014

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Comparative Variation within the Genome of Campylobacter jejuni NCTC 11168 in Human and Murine Hosts

Dallas K. Thomas, Abdul G. Lone, L. Brent Selinger, Eduardo N. Taboada, Richard R. E. Uwiera, D. Wade Abbott, G. Douglas Inglis

published 07 Feb 2014

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Variation in the MC4R Gene Is Associated with Bone Phenotypes in Elderly Swedish Women

Gaurav Garg, Jitender Kumar, Fiona E. McGuigan, Martin Ridderstråle, Paul Gerdhem, Holger Luthman, Kristina Åkesson

published 06 Feb 2014

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Evidence of Gene−Environment Interaction for Two Genes on Chromosome 4 and Environmental Tobacco Smoke in Controlling the Risk of Nonsyndromic Cleft Palate

Tao Wu, Holger Schwender, Ingo Ruczinski, Jeffrey C. Murray, Mary L. Marazita, Ronald G. Munger, Jacqueline B. Hetmanski, Margaret M. Parker, Ping Wang, Tanda Murray, Margaret Taub, Shuai Li, Richard J. Redett, M. Daniele Fallin, Kung Yee Liang, Yah Huei Wu-Chou, Samuel S. Chong, Vincent Yeow, Xiaoqian Ye, Hong Wang, Shangzhi Huang, Ethylin W. Jabs, Bing Shi, Allen J. Wilcox, Sun Ha Jee, Alan F. Scott, Terri H. Beaty

published 06 Feb 2014

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Matrix Metalloproteinase-1 (MMP-1) Promoter Polymorphisms are Well Linked with Lower Stomach Tumor Formation in Eastern Indian Population

Sanjib Dey, Nillu Ghosh, Debjit Saha, Kousik Kesh, Arnab Gupta, Snehasikta Swarnakar

published 05 Feb 2014

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Comparative Genomics of Isolates of a Pseudomonas aeruginosa Epidemic Strain Associated with Chronic Lung Infections of Cystic Fibrosis Patients

Julie Jeukens, Brian Boyle, Irena Kukavica-Ibrulj, Myriam M. Ouellet, Shawn D. Aaron, Steve J. Charette, Joanne L. Fothergill, Nicholas P. Tucker, Craig Winstanley, Roger C. Levesque

published 05 Feb 2014

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From Days to Hours: Reporting Clinically Actionable Variants from Whole Genome Sequencing

Sumit Middha, Saurabh Baheti, Steven N. Hart, Jean-Pierre A. Kocher

published 05 Feb 2014

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Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica

Pimlapas Leekitcharoenphon, Eva M. Nielsen, Rolf S. Kaas, Ole Lund, Frank M. Aarestrup

published 04 Feb 2014

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Single nucleotide polymorphisms

De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties

Genome-Wide Association Analysis and Genomic Prediction of Mycobacterium avium Subspecies paratuberculosis Infection in US Jersey Cattle

A Genome-Wide “Pleiotropy Scan” Does Not Identify New Susceptibility Loci for Estrogen Receptor Negative Breast Cancer

Joint Effects of Known Type 2 Diabetes Susceptibility Loci in Genome-Wide Association Study of Singapore Chinese: The Singapore Chinese Health Study

Integration of Sequence Data from a Consanguineous Family with Genetic Data from an Outbred Population Identifies PLB1 as a Candidate Rheumatoid Arthritis Risk Gene

Combined Genetic and High-Throughput Strategies for Molecular Diagnosis of Inherited Retinal Dystrophies

Comparative Variation within the Genome of Campylobacter jejuni NCTC 11168 in Human and Murine Hosts

Variation in the MC4R Gene Is Associated with Bone Phenotypes in Elderly Swedish Women

Evidence of Gene−Environment Interaction for Two Genes on Chromosome 4 and Environmental Tobacco Smoke in Controlling the Risk of Nonsyndromic Cleft Palate

Matrix Metalloproteinase-1 (MMP-1) Promoter Polymorphisms are Well Linked with Lower Stomach Tumor Formation in Eastern Indian Population

Comparative Genomics of Isolates of a Pseudomonas aeruginosa Epidemic Strain Associated with Chronic Lung Infections of Cystic Fibrosis Patients

From Days to Hours: Reporting Clinically Actionable Variants from Whole Genome Sequencing

Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica

Single nucleotide polymorphisms

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