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Single nucleotide polymorphisms

Out of Africa: The genomic footprints of Vietnamese Robusta coffee

Tram Vi, Thi Nhu Le, Philippe Cubry, Viet Ha Phan, Thi Tieu Oanh Dinh, Thi Bich Ngoc Tran, Van Toan Nguyen, Claude Patrick Millet, Jean-Léon Kambale, Gba Kossia Manzan Karine, Pascal Musoli, Ucu Sumirat, Jose Cassule Mahinga, Piet Stoffelen, Dapeng Zhang, Pierre Marraccini, Yves Vigouroux, Ngan Giang Khong, Valerie Poncet

published 28 May 2025

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Genome-wide scan for signatures of selection in Hanwoo and Angus cattle using whole-genome sequence data

Hyoun Ju Kim, Nasir Moghaddar, Sam Clark, Julius H. J. van der Werf, Sara de las Heras-Saldana

published 27 May 2025

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Genome-wide association studies and transcriptome analysis reveal novel genes associated with freezing tolerance in rapeseed (Brassica napus L.)

Guoqiang Zheng, Zigang Liu, Lixi Jiang, Qi Yang, Jiaping Wei, Zefeng Wu, Junmei Cui, Xiaoyun Dong, Xiaodong Cao, Xuezhen Yang, Ying Wang, Yongjie Gong, Ermei Sa, Xiaoxia Wang

published 27 May 2025

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Differentiation of European yellow rust subraces within the ‘Warrior(-)’ genetic group

Claudia Breitkreuz, Philipp Schulz, Anne-Kristin Schmitt, Kerstin Flath, Tiphaine Vidal, Amelia Hubbard, Kostya Kanyuka, Andreas Stahl, Jens Keilwagen, Dragan Perovic

published 23 May 2025

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Transmissible antimicrobial resistance in Escherichia coli isolated from household drinking water in Ibadan, Nigeria

Akeem G. Rabiu, Olutayo I. Falodun, Rotimi A. Dada, Ayorinde O. Afolayan, Olabisi C. Akinlabi, Elizabeth T. Akande, Iruka N. Okeke

published 23 May 2025

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Genome-wide association analysis and genomic selection for leaf-related traits of maize

Yukang Zeng, Xiaoming Xu, Jiale Jiang, Shaohang Lin, Zehui Fan, Yao Meng, Atikaimu Maimaiti, Penghao Wu, Jiaojiao Ren

published 22 May 2025

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Population genetic diversity and structure of the endangered species Tetracentron sinense Oliver (Tetracentraceae) with SNPs based on RAD sequencing

Zhong–Qiong Tian, Chao–Yang Jiang, Yu–Min Shu, Huan Zhang, Qiong La, Xiao-Hong Gan

published 20 May 2025

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Understanding the epidemiology and pathogenesis of Mycobacterium tuberculosis with non-redundant pangenome of epidemic strains in China

Yang Zhou, Richard Anthony, Shengfen Wang, Hui Xia, Xichao Ou, Bing Zhao, Yuanyuan Song, Yang Zheng, Ping He, Dongxin Liu, Yanlin Zhao, Dick van Soolingen

published 19 May 2025

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Exploring the causal link between serum 25-hydroxyvitamin D concentrations and idiopathic sudden sensorineural hearing loss: Insights gained from a Mendelian randomization study involving two independent samples

Ying Zhao, Cong Yu, Hengchang Sun, Fangmei Xie, Jian Shen, Xiaoming Li, Xiaoyu Song, Wenfeng Luo, Jinhua He, Zeping Han

published 19 May 2025

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Genetic control of the leaf ionome in pearl millet and correlation with root and agromorphological traits

Princia Nakombo-Gbassault, Sebastian Arenas, Pablo Affortit, Awa Faye, Paulina Flis, Bassirou Sine, Daniel Moukouanga, Pascal Gantet, Ephrem Kosh Komba, Ndjido Kane, Malcolm Bennett, Darren Wells, Philippe Cubry, Elizabeth Bailey, Alexandre Grondin, Yves Vigouroux, Laurent Laplaze

published 19 May 2025

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SOX7: Autism associated gene identified by analysis of multi-Omics data

Samantha Gonzales, Jane Zizhen Zhao, Na Young Choi, Prabha Acharya, Sehoon Jeong, Xuexia Wang, Moo-Yeal Lee

published 15 May 2025

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Polymorphisms in rs2069845 are associated with IL-6 and soluble IL-6 receptor levels during total joint replacement

Kyle D. Anderson, Bryan Dulion, John Wong, Niyati Patel, Anne DeBenedetti, Craig J. Della Valle, Ryan D. Ross

published 15 May 2025

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dTOURS: Dense-region tagging for outbreak detection using ratio statistics

Lukas Wagner, Richa Agarwala

published 13 May 2025

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