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Simulation and modeling

Towards a Physiology-Based Measure of Pain: Patterns of Human Brain Activity Distinguish Painful from Non-Painful Thermal Stimulation

Justin E. Brown, Neil Chatterjee, Jarred Younger, Sean Mackey

published 13 Sep 2011

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AMD, an Automated Motif Discovery Tool Using Stepwise Refinement of Gapped Consensuses

Jiantao Shi, Wentao Yang, Mingjie Chen, Yanzhi Du, Ji Zhang, Kankan Wang

published 12 Sep 2011

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An Exact Expression to Calculate the Derivatives of Position-Dependent Observables in Molecular Simulations with Flexible Constraints

Pablo Echenique, Claudio N. Cavasotto, Monica De Marco, Pablo Garca-Risueño, J.L. Alonso

published 12 Sep 2011

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Assessing Significance in High-Throughput Experiments by Sequential Goodness of Fit and q-Value Estimation

Antonio Carvajal-Rodriguez, Jacobo de Uña-Alvarez

published 09 Sep 2011

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Haplotype Estimation from Fuzzy Genotypes Using Penalized Likelihood

Hae-Won Uh, Paul H. C. Eilers

published 08 Sep 2011

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A Systematic Analysis of Eluted Fraction of Plasma Post Immunoaffinity Depletion: Implications in Biomarker Discovery

Amit Kumar Yadav, Gourav Bhardwaj, Trayambak Basak, Dhirendra Kumar, Shadab Ahmad, Ruby Priyadarshini, Ashish Kumar Singh, Debasis Dash, Shantanu Sengupta

published 07 Sep 2011

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Targeted Drug Delivery by Gemtuzumab Ozogamicin: Mechanism-Based Mathematical Model for Treatment Strategy Improvement and Therapy Individualization

Eva Jager, Vincent H. J. van der Velden, Jeroen G. te Marvelde, Roland B. Walter, Zvia Agur, Vladimir Vainstein

published 07 Sep 2011

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The Wiring Economy Principle: Connectivity Determines Anatomy in the Human Brain

Ashish Raj, Yu-hsien Chen

published 07 Sep 2011

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Disease Gene Interaction Pathways: A Potential Framework for How Disease Genes Associate by Disease-Risk Modules

Lina Chen, Wan Li, Liangcai Zhang, Hong Wang, Weiming He, Jingxie Tai, Xu Li, Xia Li

published 06 Sep 2011

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A Network-Based Approach to Prioritize Results from Genome-Wide Association Studies

Nirmala Akula, Ancha Baranova, Donald Seto, Jeffrey Solka, Michael A. Nalls, Andrew Singleton, Luigi Ferrucci, Toshiko Tanaka, Stefania Bandinelli, Yoon Shin Cho, Young Jin Kim, Jong-Young Lee, Bok-Ghee Han, Bipolar Disorder Genome Study (BiGS) Consortium , The Wellcome Trust Case-Control Consortium , Francis J. McMahon

published 06 Sep 2011

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Ethnicity and Population Structure in Personal Naming Networks

Pablo Mateos, Paul A. Longley, David O'Sullivan

published 06 Sep 2011

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Ranking Candidate Disease Genes from Gene Expression and Protein Interaction: A Katz-Centrality Based Approach

Jing Zhao, Ting-Hong Yang, Yongxu Huang, Petter Holme

published 02 Sep 2011

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Tree-Based Position Weight Matrix Approach to Model Transcription Factor Binding Site Profiles

Yingtao Bi, Hyunsoo Kim, Ravi Gupta, Ramana V. Davuluri

published 02 Sep 2011

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