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Simulation and modeling

Global Considerations in Hierarchical Clustering Reveal Meaningful Patterns in Data

Roy Varshavsky, David Horn, Michal Linial

Heterologous Protein Expression Is Enhanced by Harmonizing the Codon Usage Frequencies of the Target Gene with those of the Expression Host

Evelina Angov, Collette J. Hillier, Randall L. Kincaid, Jeffrey A. Lyon

Agent Based Modelling Helps in Understanding the Rules by Which Fibroblasts Support Keratinocyte Colony Formation

Tao Sun, Phil McMinn, [ ... ], Sheila MacNeil

An Analysis of the Abstracts Presented at the Annual Meetings of the Society for Neuroscience from 2001 to 2006

John M. Lin, Jason W. Bohland, [ ... ], Partha P. Mitra

Automated Three-Dimensional Detection and Shape Classification of Dendritic Spines from Fluorescence Microscopy Images

Alfredo Rodriguez, Douglas B. Ehlenberger, [ ... ], Susan L. Wearne

Late Entry to HIV Care Limits the Impact of Anti-Retroviral Therapy in the Netherlands

Colette Smit, Timothy B. Hallett, [ ... ], Frank de Wolf

The Effect of Diagnostic Delays on the Drop-Out Rate and the Total Delay to Diagnosis of Tuberculosis

Stephen J. Millen, Pieter W. Uys, [ ... ], Brian G. Williams

How to Derive Biological Information from the Value of the Normalization Constant in Allometric Equations

Pekka Kaitaniemi

Learning and Innovative Elements of Strategy Adoption Rules Expand Cooperative Network Topologies

Shijun Wang, Máté S. Szalay, Changshui Zhang, Peter Csermely

A Comparison of Phylogenetic Network Methods Using Computer Simulation

Steven M. Woolley, David Posada, Keith A. Crandall

Quantitative Multicolor Compositional Imaging Resolves Molecular Domains in Cell-Matrix Adhesions

Eli Zamir, Benjamin Geiger, Zvi Kam

Estimation of Relevant Variables on High-Dimensional Biological Patterns Using Iterated Weighted Kernel Functions

Sergio Rojas-Galeano, Emily Hsieh, [ ... ], Delmiro Fernandez-Reyes

Identification of Direct Target Genes Using Joint Sequence and Expression Likelihood with Application to DAF-16

Ron X. Yu, Jie Liu, Nick True, Wei Wang

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