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Shotgun sequencing

Random Whole Metagenomic Sequencing for Forensic Discrimination of Soils

Anastasia S. Khodakova, Renee J. Smith, Leigh Burgoyne, Damien Abarno, Adrian Linacre

published 11 Aug 2014

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Structure, Composition and Metagenomic Profile of Soil Microbiomes Associated to Agricultural Land Use and Tillage Systems in Argentine Pampas

Belén Carbonetto, Nicolás Rascovan, Roberto Álvarez, Alejandro Mentaberry, Martin P. Vázquez

published 12 Jun 2014

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Direct Sequencing from the Minimal Number of DNA Molecules Needed to Fill a 454 Picotiterplate

Mária Džunková, Marc Garcia-Garcerà, Llúcia Martínez-Priego, Giussepe D’Auria, Francesc Calafell, Andrés Moya

published 02 Jun 2014

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Human and Environmental Impacts on River Sediment Microbial Communities

Sean M. Gibbons, Edwin Jones, Angelita Bearquiver, Frederick Blackwolf, Wayne Roundstone, Nicole Scott, Jeff Hooker, Robert Madsen, Maureen L. Coleman, Jack A. Gilbert

published 19 May 2014

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The Prevalence of Species and Strains in the Human Microbiome: A Resource for Experimental Efforts

Laurens Kraal, Sahar Abubucker, Karthik Kota, Michael A. Fischbach, Makedonka Mitreva

published 14 May 2014

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Sequencing Degraded DNA from Non-Destructively Sampled Museum Specimens for RAD-Tagging and Low-Coverage Shotgun Phylogenetics

Mandy Man-Ying Tin, Evan Philip Economo, Alexander Sergeyevich Mikheyev

published 14 May 2014

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Shotgun Pyrosequencing Metagenomic Analyses of Dusts from Swine Confinement and Grain Facilities

Robert J. Boissy, Debra J. Romberger, William A. Roughead, Lisa Weissenburger-Moser, Jill A. Poole, Tricia D. LeVan

published 18 Apr 2014

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Complete Genome Sequence of the Biocontrol Strain Pseudomonas protegens Cab57 Discovered in Japan Reveals Strain-Specific Diversity of This Species

Kasumi Takeuchi, Naomi Noda, Nobutaka Someya

published 02 Apr 2014

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MetaMetaDB: A Database and Analytic System for Investigating Microbial Habitability

Ching-chia Yang, Wataru Iwasaki

published 27 Jan 2014

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The Genome Sequence of the Fungal Pathogen Fusarium virguliforme That Causes Sudden Death Syndrome in Soybean

Subodh K. Srivastava, Xiaoqiu Huang, Hargeet K. Brar, Ahmad M. Fakhoury, Burton H. Bluhm, Madan K. Bhattacharyya

published 14 Jan 2014

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32 species validation of a new Illumina paired-end approach for the development of microsatellites

Stacey L. Lance, Cara N. Love, Schyler O. Nunziata, Jason R. O’Bryhim, David E. Scott, R. Wesley Flynn, Kenneth L. Jones

published 28 Nov 2013

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Metagenomic Insights into the Carbohydrate-Active Enzymes Carried by the Microorganisms Adhering to Solid Digesta in the Rumen of Cows

Lingling Wang, Ayat Hatem, Umit V. Catalyurek, Mark Morrison, Zhongtang Yu

published 05 Nov 2013

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NeSSM: A Next-Generation Sequencing Simulator for Metagenomics

Ben Jia, Liming Xuan, Kaiye Cai, Zhiqiang Hu, Liangxiao Ma, Chaochun Wei

published 04 Oct 2013

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