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Shotgun sequencing

Construction of High-Density Genetic Map in Barley through Restriction-Site Associated DNA Sequencing

Gaofeng Zhou, Qisen Zhang, Xiao-qi Zhang, Cong Tan, Chengdao Li

published 16 Jul 2015

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Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

Ron Pinhasi, Daniel Fernandes, Kendra Sirak, Mario Novak, Sarah Connell, Songül Alpaslan-Roodenberg, Fokke Gerritsen, Vyacheslav Moiseyev, Andrey Gromov, Pál Raczky, Alexandra Anders, Michael Pietrusewsky, Gary Rollefson, Marija Jovanovic, Hiep Trinhhoang, Guy Bar-Oz, Marc Oxenham, Hirofumi Matsumura, Michael Hofreiter

published 18 Jun 2015

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Cloning, Sequencing, and Expression of Selenoprotein Transcripts in the Turkey (Meleagris gallopavo)

Roger A. Sunde, Gavin R. Sunde, Colin M. Sunde, Milton L. Sunde, Jacqueline K. Evenson

published 12 Jun 2015

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Screening Currency Notes for Microbial Pathogens and Antibiotic Resistance Genes Using a Shotgun Metagenomic Approach

Saakshi Jalali, Samantha Kohli, Chitra Latka, Sugandha Bhatia, Shamsudheen Karuthedath Vellarikal, Sridhar Sivasubbu, Vinod Scaria, Srinivasan Ramachandran

published 02 Jun 2015

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Identification and Functional Analysis of Genome Mutations in a Fluoride-Resistant Streptococcus mutans Strain

Ying Liao, Jianwei Chen, Bernd Willem Brandt, Yuanfang Zhu, Jiyao Li, Cor van Loveren, Dong Mei Deng

published 09 Apr 2015

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Target-Dependent Enrichment of Virions Determines the Reduction of High-Throughput Sequencing in Virus Discovery

Randi Holm Jensen, Sarah Mollerup, Tobias Mourier, Thomas Arn Hansen, Helena Fridholm, Lars Peter Nielsen, Eske Willerslev, Anders Johannes Hansen, Lasse Vinner

published 08 Apr 2015

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Altered Microbiomes in Bovine Digital Dermatitis Lesions, and the Gut as a Pathogen Reservoir

Martin Zinicola, Fabio Lima, Svetlana Lima, Vinicius Machado, Marilia Gomez, Dörte Döpfer, Charles Guard, Rodrigo Bicalho

published 17 Mar 2015

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Metagenome of a Microbial Community Inhabiting a Metal-Rich Tropical Stream Sediment

Patrícia S. Costa, Mariana P. Reis, Marcelo P. Ávila, Laura R. Leite, Flávio M. G. de Araújo, Anna C. M. Salim, Guilherme Oliveira, Francisco Barbosa, Edmar Chartone-Souza, Andréa M. A. Nascimento

published 05 Mar 2015

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Whole Genome Complete Resequencing of Bacillus subtilis Natto by Combining Long Reads with High-Quality Short Reads

Mayumi Kamada, Sumitaka Hase, Kengo Sato, Atsushi Toyoda, Asao Fujiyama, Yasubumi Sakakibara

published 16 Oct 2014

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Hybridization Capture Using Short PCR Products Enriches Small Genomes by Capturing Flanking Sequences (CapFlank)

Kyriakos Tsangaras, Nathan Wales, Thomas Sicheritz-Pontén, Simon Rasmussen, Johan Michaux, Yasuko Ishida, Serge Morand, Marie-Louise Kampmann, M. Thomas P. Gilbert, Alex D. Greenwood

published 02 Oct 2014

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Phylogenetic and Metagenomic Analyses of Substrate-Dependent Bacterial Temporal Dynamics in Microbial Fuel Cells

Husen Zhang, Xi Chen, Daniel Braithwaite, Zhen He

published 09 Sep 2014

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Closely Related NDM-1-Encoding Plasmids from Escherichia coli and Klebsiella pneumoniae in Taiwan

Chao-Ju Chen, Tsu-Lan Wu, Po-Liang Lu, Ying-Tsong Chen, Chang-Phone Fung, Yin-Ching Chuang, Jung-Chung Lin, L. Kristopher Siu

published 21 Aug 2014

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Elevated Levels of Circulating DNA in Cardiovascular Disease Patients: Metagenomic Profiling of Microbiome in the Circulation

Vasudevan Dinakaran, Andiappan Rathinavel, Muthuirulan Pushpanathan, Ramamoorthy Sivakumar, Paramasamy Gunasekaran, Jeyaprakash Rajendhran

published 18 Aug 2014

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