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Shotgun sequencing

Noninvasive Prenatal Molecular Karyotyping from Maternal Plasma

Stephanie C. Y. Yu, Peiyong Jiang, [ ... ], Rossa W. K. Chiu

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences

Swee Hoe Ong, Vinutha Uppoor Kukkillaya, [ ... ], Niranjan Nagarajan

Mitochondrial Phylogenomics of Modern and Ancient Equids

Julia T. Vilstrup, Andaine Seguin-Orlando, [ ... ], Ludovic Orlando

Microsatellites for Next-Generation Ecologists: A Post-Sequencing Bioinformatics Pipeline

Iria Fernandez-Silva, Jonathan Whitney, [ ... ], Stephen A. Karl

OTU Analysis Using Metagenomic Shotgun Sequencing Data

Xiaolin Hao, Ting Chen

Two Different High Throughput Sequencing Approaches Identify Thousands of De Novo Genomic Markers for the Genetically Depleted Bornean Elephant

Reeta Sharma, Benoit Goossens, [ ... ], Lounès Chikhi

Use of Four Next-Generation Sequencing Platforms to Determine HIV-1 Coreceptor Tropism

John Archer, Jan Weber, [ ... ], Miguel E. Quiñones-Mateu

CREST – Classification Resources for Environmental Sequence Tags

Anders Lanzén, Steffen L. Jørgensen, [ ... ], Tim Urich

Choosing the Best Plant for the Job: A Cost-Effective Assay to Prescreen Ancient Plant Remains Destined for Shotgun Sequencing

Nathan Wales, J. Alberto Romero-Navarro, Enrico Cappellini, M. Thomas P Gilbert

Genometa - A Fast and Accurate Classifier for Short Metagenomic Shotgun Reads

Colin F. Davenport, Jens Neugebauer, [ ... ], Frauke Sprengel

An Improvement of Shotgun Proteomics Analysis by Adding Next-Generation Sequencing Transcriptome Data in Orange

Jiaping Song, Renjie Sun, [ ... ], Yong Zhang

Reconstruction of Ribosomal RNA Genes from Metagenomic Data

Lu Fan, Kerensa McElroy, Torsten Thomas

Evaluation of 16S rDNA-Based Community Profiling for Human Microbiome Research

Jumpstart Consortium Human Microbiome Project Data Generation Working Group

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