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Sequencing techniques

Genome-wide identification and characterization of microRNAs by small RNA sequencing for low nitrogen stress in potato

Jagesh Kumar Tiwari, Tanuja Buckseth, [ ... ], Swarup Kumar Chakrabarti

Sequence-structure-function relationships in class I MHC: A local frustration perspective

Onur Serçinoğlu, Pemra Ozbek

NMR resonance assignment and structure prediction of the C-terminal domain of the microtubule end-binding protein 3

Hazem Abdelkarim, Ben Hitchinson, [ ... ], Vadim Gaponenko

iterb-PPse: Identification of transcriptional terminators in bacterial by incorporating nucleotide properties into PseKNC

Yongxian Fan, Wanru Wang, Qingqi Zhu

Isolation of a novel species in the genus Cupriavidus from a patient with sepsis using whole genome sequencing

Oh Joo Kweon, Yong Kwan Lim, [ ... ], Mi-Kyung Lee

Liquid biopsy-based tumor profiling for metastatic colorectal cancer patients with ultra-deep targeted sequencing

Jun-Kyu Kang, Sunghoon Heo, [ ... ], Tae-You Kim

De novo transcriptome sequence of Senna tora provides insights into anthraquinone biosynthesis

Sang-Ho Kang, Woo-Haeng Lee, [ ... ], Tae-Jin Oh

Comparative analysis of tissue-specific transcriptomic responses to nitrogen stress in spinach (Spinacia oleracea)

Vijay Joshi, Madhumita Joshi, Arianne Penalosa

Selection and exploitation of prevalent, tandemly repeated genomic targets for improved real-time PCR-based detection of Wuchereria bancrofti and Plasmodium falciparum in mosquitoes

Michael F. Zulch, Nils Pilotte, [ ... ], Steven A. Williams

Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection

Travis M. Ruff, Elliott J. Marston, [ ... ], Deven R. See

Combining signal and sequence to detect RNA polymerase initiation in ATAC-seq data

Ignacio J. Tripodi, Murad Chowdhury, Margaret Gruca, Robin D. Dowell

Benchmarking RNA-seq differential expression analysis methods using spike-in and simulation data

Bukyung Baik, Sora Yoon, Dougu Nam

Sequence count data are poorly fit by the negative binomial distribution

Stijn Hawinkel, J. C. W. Rayner, Luc Bijnens, Olivier Thas

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