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Sequencing techniques

Rosetta:MSF:NN: Boosting performance of multi-state computational protein design with a neural network

Julian Nazet, Elmar Lang, Rainer Merkl

published 26 Aug 2021

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Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals

Harsha Doddapaneni, Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula, Hsu Chao, Vipin Menon, Erin Nicholson, David Henke, Felipe-Andres Piedra, Anubama Rajan, Zeineen Momin, Kavya Kottapalli, Kristi L. Hoffman, Fritz J. Sedlazeck, Ginger Metcalf, Pedro A. Piedra, Donna M. Muzny, Joseph F. Petrosino, Richard A. Gibbs

published 25 Aug 2021

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Human norovirus GII.4 Hong Kong variant shares common ancestry with GII.4 Osaka and emerged in Thailand in 2016

Watchaporn Chuchaona, Jira Chansaenroj, Jiratchaya Puenpa, Sarawut Khongwichit, Sumeth Korkong, Sompong Vongpunsawad, Yong Poovorawan

published 23 Aug 2021

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Determination of variable region sequences from hybridoma immunoglobulins that target Mycobacterium tuberculosis virulence factors

Hui-Chen Chang Foreman, Andrew Frank, Timothy T. Stedman

published 20 Aug 2021

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Molecular Characterization and Demographic Study on Infectious Bursal Disease Virus in Faisalabad District

Sanaullah Sajid, Sajjad ur Rahman, Mashkoor Mohsin Gilani, Zia ud Din Sindhu, Manel Ben Ali, Amor Hedfi, Mohammed Almalki, Shahid Mahmood

published 16 Aug 2021

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Nested PCR followed by NGS: Validation and application for HPV genotyping of Tunisian cervical samples

Monia Ardhaoui, Emna Ennaifer, Anna Christina De Matos Salim, Flávio Marcom Gomez, Thalja Laasili, Med Samir Boubaker, Ikram Guizani

published 11 Aug 2021

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Properties of peptides released from salmon and carp via simulated human-like gastrointestinal digestion described applying quantitative parameters

Justyna Borawska-Dziadkiewicz, Małgorzata Darewicz, Anna Sylwia Tarczyńska

published 10 Aug 2021

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Developmental chronodisruption alters placental signaling in mice

Danielle A. Clarkson-Townsend, Katie L. Bales, Karen E. Hermetz, Amber A. Burt, Machelle T. Pardue, Carmen J. Marsit

published 09 Aug 2021

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Validation of a redesigned pan-poliovirus assay and real-time PCR platforms for the global poliovirus laboratory network

Hong Sun, Chelsea Harrington, Nancy Gerloff, Mark Mandelbaum, Stacey Jeffries-Miles, Lea Necitas G. Apostol, Ma. Anne-Lesley D. Valencia, Shahzad Shaukat, Mehar Angez, Deepa K. Sharma, Uma P. Nalavade, Shailesh D. Pawar, Elisabeth Pukuta Simbu, Seta Andriamamonjy, Richter Razafindratsimandresy, Everardo Vega

published 06 Aug 2021

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Prolonged detection of complete viral genomes demonstrated by SARS-CoV-2 sequencing of serial respiratory specimens

Neta S. Zuckerman, Efrat Bucris, Oran Erster, Michal Mandelboim, Amos Adler, Saar Burstein, Noam Protter, Moran Szwarcwort-Cohen, Ella Mendelson, Orna Mor

published 05 Aug 2021

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Prediction of HIV drug resistance based on the 3D protein structure: Proposal of molecular field mapping

Ryosaku Ota, Kanako So, Masahiro Tsuda, Yuriko Higuchi, Fumiyoshi Yamashita

published 04 Aug 2021

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Lapatinib and poziotinib overcome ABCB1-mediated paclitaxel resistance in ovarian cancer

J. Robert McCorkle, Justin W. Gorski, Jinpeng Liu, McKayla B. Riggs, Anthony B. McDowell, Nan Lin, Chi Wang, Frederick R. Ueland, Jill M. Kolesar

published 04 Aug 2021

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Antigenic and immunogenic evaluation of permutations of soluble hepatitis C virus envelope protein E2 and E1 antigens

Jannick Prentoe, Christoph M. Janitzek, Rodrigo Velázquez-Moctezuma, Louise Goksøyr, Rebecca W. Olsen, Margherita Fanalista, Elias H. Augestad, Susan Thrane, Anne F. Pihl, Judith M. Gottwein, Adam F. Sander, Jens Bukh

published 30 Jul 2021

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