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Sequencing techniques

Tumor Transcriptome Sequencing Reveals Allelic Expression Imbalances Associated with Copy Number Alterations

Brian B. Tuch, Rebecca R. Laborde, Xing Xu, Jian Gu, Christina B. Chung, Cinna K. Monighetti, Sarah J. Stanley, Kerry D. Olsen, Jan L. Kasperbauer, Eric J. Moore, Adam J. Broomer, Ruoying Tan, Pius M. Brzoska, Matthew W. Muller, Asim S. Siddiqui, Yan W. Asmann, Yongming Sun, Scott Kuersten, Melissa A. Barker, Francisco M. De La Vega, David I. Smith

published 19 Feb 2010

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Molecular and Phylogenetic Analyses Suggest an Additional Hepatitis B Virus Genotype “I”

Hai Yu, Quan Yuan, Sheng-Xiang Ge, Hurng-Yi Wang, Ya-Li Zhang, Qing-Rui Chen, Jun Zhang, Pei-Jer Chen, Ning-Shao Xia

published 19 Feb 2010

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Cryptochrome Genes Are Highly Expressed in the Ovary of the African Clawed Frog, Xenopus tropicalis

Yoko Kubo, Takahiro Takeuchi, Keiko Okano, Toshiyuki Okano

published 17 Feb 2010

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HIV Drug Resistance Surveillance Using Pooled Pyrosequencing

Hezhao Ji, Nathalie Massé, Shaun Tyler, Ben Liang, Yang Li, Harriet Merks, Morag Graham, Paul Sandstrom, James Brooks

published 17 Feb 2010

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A Complete Mitochondrial Genome Sequence from a Mesolithic Wild Aurochs (Bos primigenius)

Ceiridwen J. Edwards, David A. Magee, Stephen D. E. Park, Paul A. McGettigan, Amanda J. Lohan, Alison Murphy, Emma K. Finlay, Beth Shapiro, Andrew T. Chamberlain, Martin B. Richards, Daniel G. Bradley, Brendan J. Loftus, David E. MacHugh

published 17 Feb 2010

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The DIANA-mirExTra Web Server: From Gene Expression Data to MicroRNA Function

Panagiotis Alexiou, Manolis Maragkakis, Giorgio L. Papadopoulos, Victor A. Simmosis, Lin Zhang, Artemis G. Hatzigeorgiou

published 11 Feb 2010

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Monitoring Genomic Sequences during SELEX Using High-Throughput Sequencing: Neutral SELEX

Bob Zimmermann, Tanja Gesell, Doris Chen, Christina Lorenz, Renée Schroeder

published 11 Feb 2010

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Alternative Splicing of the Angiogenesis Associated Extra-Domain B of Fibronectin Regulates the Accessibility of the B-C Loop of the Type III Repeat 8

Elisa Ventura, Francesca Sassi, Arianna Parodi, Enrica Balza, Laura Borsi, Patrizia Castellani, Barbara Carnemolla, Luciano Zardi

published 10 Feb 2010

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Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes

Matthew R. Henn, Matthew B. Sullivan, Nicole Stange-Thomann, Marcia S. Osburne, Aaron M. Berlin, Libusha Kelly, Chandri Yandava, Chinnappa Kodira, Qiandong Zeng, Michael Weiand, Todd Sparrow, Sakina Saif, Georgia Giannoukos, Sarah K. Young, Chad Nusbaum, Bruce W. Birren, Sallie W. Chisholm

published 05 Feb 2010

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Identification of trkH, Encoding a Potassium Uptake Protein Required for Francisella tularensis Systemic Dissemination in Mice

Khaled Alkhuder, Karin L. Meibom, Iharilalao Dubail, Marion Dupuis, Alain Charbit

published 29 Jan 2010

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Tus, an E. coli Protein, Contains Mammalian Nuclear Targeting and Exporting Signals

Stanislaw J. Kaczmarczyk, Kalavathy Sitaraman, Thomas Hill, James L. Hartley, Deb K. Chatterjee

published 26 Jan 2010

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The Behaviour of 5-Hydroxymethylcytosine in Bisulfite Sequencing

Yun Huang, William A. Pastor, Yinghua Shen, Mamta Tahiliani, David R. Liu, Anjana Rao

published 26 Jan 2010

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Parallel and Convergent Evolution of the Dim-Light Vision Gene RH1 in Bats (Order: Chiroptera)

Yong-Yi Shen, Jie Liu, David M. Irwin, Ya-Ping Zhang

published 21 Jan 2010

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