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Sequencing techniques

Comparative transcriptome analysis of Liriomyza trifolii (Burgess) and Liriomyza sativae (Blanchard) (Diptera: Agromyzidae) in response to rapid cold hardening

Junaid Iqbal, Xiao-Xiang Zhang, Ya-Wen Chang, Yu-Zhou Du

published 15 Dec 2022

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Improved detection of SBDS gene mutation by a new method of next-generation sequencing analysis based on the Chinese mutation spectrum

Dong Wu, Li Zhang, Yuzhen Qiang, Kaiyu Wang

published 13 Dec 2022

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Comparison between relative and absolute quantitative real-time PCR applied to single-cell analyses: Transcriptional levels in a key neuron for long-term memory in the pond snail

Dai Hatakeyama, Nozomi Chikamoto, Kanta Fujimoto, Takashi Kitahashi, Etsuro Ito

published 12 Dec 2022

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Whole blood RNA-seq demonstrates an increased host immune response in individuals with cystic fibrosis who develop nontuberculous mycobacterial pulmonary disease

Miguel Dario Prieto, Jiah Jang, Alessandro N. Franciosi, Yossef Av-Gay, Horacio Bach, Scott J. Tebbutt, Bradley S. Quon

published 08 Dec 2022

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Targeted deep sequencing analyses of long QT syndrome in a Japanese population

Yuki Nagata, Ryo Watanabe, Christian Eichhorn, Seiko Ohno, Takeshi Aiba, Taisuke Ishikawa, Yukiko Nakano, Yoshiyasu Aizawa, Kenshi Hayashi, Nobuyuki Murakoshi, Tadashi Nakajima, Nobue Yagihara, Hiroyuki Mishima, Takeaki Sudo, Chihiro Higuchi, Atsushi Takahashi, Akihiro Sekine, Takeru Makiyama, Yoshihiro Tanaka, Atsuyuki Watanabe, Motomi Tachibana, Hiroshi Morita, Koh-ichiro Yoshiura, Tatsuhiko Tsunoda, Hiroshi Watanabe, Masahiko Kurabayashi, Akihiko Nogami, Yasuki Kihara, Minoru Horie, Wataru Shimizu, Naomasa Makita, Toshihiro Tanaka

published 08 Dec 2022

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Feasibility of combining short tandem repeats (STRs) haplotyping with preimplantation genetic diagnosis (PGD) in screening for beta thalassemia

Vu Viet Ha Vuong, Thinh Huy Tran, Phuoc-Dung Nguyen, Nha Nguyen Thi, Phuong Le Thi, Dang Thi Minh Nguyet, Manh-Ha Nguyen, The-Hung Bui, Thanh Van Ta, Van-Khanh Tran

published 07 Dec 2022

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Nanopore sequencing data analysis using Microsoft Azure cloud computing service

Linh Truong, Felipe Ayora, Lloyd D’Orsogna, Patricia Martinez, Dianne De Santis

published 02 Dec 2022

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Optimized conditions for Listeria, Salmonella and Escherichia whole genome sequencing using the Illumina iSeq100 platform with point-and-click bioinformatic analysis

Sonsiray Alvarez Narvaez, Zhenyu Shen, Lifang Yan, Brianna L. S. Stenger, Laura B. Goodman, Ailam Lim, Ruth H. Nissly, Meera Surendran Nair, Shuping Zhang, Susan Sanchez

published 30 Nov 2022

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Human papillomavirus genotyping using next generation sequencing (NGS) in cervical lesions: Genotypes by histologic grade and their relative proportion in multiple infections

Jorge Alejandro Basiletti, Joan Valls, Tomás Poklépovich, María Dolores Fellner, Maryluz Rol, Rafael Alonso, Rita Mariel Correa, María Celeste Colucci, Mercedes Rodríguez de la Peña, Paula Gabriela Falabella, Agustina Saíno, Josefina Campos, Rolando Herrero, Maribel Almonte, María Alejandra Picconi

published 23 Nov 2022

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Whole exome sequencing identifies KIF26B, LIFR and LAMC1 mutations in familial vesicoureteral reflux

Zsuzsa I. Bartik, Ulla Sillén, Anna Djos, Anna Lindholm, Susanne Fransson

published 23 Nov 2022

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Reversible shifts between interstitial and epibenthic habitats in evolutionary history: Molecular phylogeny of the marine flatworm family Boniniidae (Platyhelminthes: Polycladida: Cotylea) with descriptions of two new species

Aoi Tsuyuki, Yuki Oya, Hiroshi Kajihara

published 23 Nov 2022

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A pyridinesulfonamide derivative FD268 suppresses cell proliferation and induces apoptosis via inhibiting PI3K pathway in acute myeloid leukemia

Yi Chen, Tianze Wu, Chengbin Yang, Mingzhu Lu, Zhenxia Chen, Mingli Deng, Yu Jia, Yongtai Yang, Xiaofeng Liu, Hongyan Wang, Yun Ling, Lei Lu, Yaming Zhou

published 22 Nov 2022

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The integrated transcriptome bioinformatics analysis identifies key genes and cellular components for proliferative diabetic retinopathy

Nan Gao, Shengli Hao, Guannan Huang, Weiting Hao, Long Su

published 21 Nov 2022

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