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Sequencing techniques

Detection and prevalence of a novel Bandavirus related to Guertu virus in Amblyomma gemma ticks and human populations in Isiolo County, Kenya

Hellen Koka, Solomon Langat, Samuel Oyola, Faith Cherop, Gilbert Rotich, James Mutisya, Victor Ofula, Konongoi Limbaso, Juliette R. Ongus, Joel Lutomiah, Rosemary Sang

published 20 Sep 2024

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Graph-based analysis of DNA sequence comparison in closed cotton species: A generalized method to unveil genetic connections

Riaz Hussain Khan, Nadeem Salamat, A. Q. Baig, Zaffar Ahmed Shaikh, Amr Yousef

published 17 Sep 2024

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Life in the fastlane? A comparative analysis of gene expression profiles across annual, semi-annual, and non-annual killifishes (Cyprinodontiformes: Nothobranchiidae)

Chi Jing Leow, Kyle R. Piller

published 10 Sep 2024

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Comparison and development of cross-study normalization methods for inter-species transcriptional analysis

Sofya Feldman, Hadas Ner-Gaon, Eran Treister, Tal Shay

published 10 Sep 2024

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An analysis of differential gene expression in peripheral nerve and muscle utilizing RNA sequencing after polyethylene glycol nerve fusion in a rat sciatic nerve injury model

Samantha N. Weiss, Joseph M. Legato, Yichuan Liu, Courtney N. Vaccaro, Renata Pellegrino Da Silva, Sandra Miskiel, Grace V. Gilbert, Hakon Hakonarson, David A. Fuller, Russell J. Buono

published 04 Sep 2024

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A reproducible approach for the use of aptamer libraries for the identification of Aptamarkers for brain amyloid deposition based on plasma analysis

Cathal Meehan, Soizic Lecocq, Gregory Penner

published 27 Aug 2024

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Single-cell RNA sequencing of nc886, a non-coding RNA transcribed by RNA polymerase III, with a primer spike-in strategy

Gyeong-Jin Shin, Byung-Han Choi, Hye Hyeon Eum, Areum Jo, Nayoung Kim, Huiram Kang, Dongwan Hong, Jiyoung Joan Jang, Hwi-Ho Lee, Yeon-Su Lee, Yong Sun Lee, Hae-Ock Lee

published 27 Aug 2024

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PredIL13: Stacking a variety of machine and deep learning methods with ESM-2 language model for identifying IL13-inducing peptides

Hiroyuki Kurata, Md. Harun-Or-Roshid, Sho Tsukiyama, Kazuhiro Maeda

published 22 Aug 2024

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Effect of light on ascorbic acid biosynthesis and bioinformatics analysis of related genes in Chinese chives

Yuxuan Qian, Jing Tong, Ning Liu, Baoju Wang, Yanhai Ji, Zhanhui Wu

published 22 Aug 2024

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Germline multigene panel testing in acute and chronic pancreatitis

Mitchell L. Ramsey, Brandie Heald, Yevgeniya Gokun, Josie Baker, J. Royce Groce, Samuel Han, Phil A. Hart, Somashekar G. Krishna, Luis F. Lara, Peter J. Lee, Georgios I. Papachristou, Rachel Pearlman, Sarah Poll, Maegan E. Roberts, Peter P. Stanich

published 22 Aug 2024

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Simulation-guided tunable DNA probe design for mismatch tolerant hybridization

Pallavi Bugga, Vishwaratn Asthana, Rebekah Drezek

published 22 Aug 2024

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Robust isolation protocol for mouse leukocytes from blood and liver resident cells for immunology research

Dorien De Pooter, Ben De Clerck, Koen Dockx, Domenica De Santis, Sarah Sauviller, Pascale Dehertogh, Matthias Beyens, Isabelle Bergiers, Isabel Nájera, Ellen Van Gulck, Nádia Conceição-Neto, Wim Pierson

published 22 Aug 2024

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An investigation of plasma cell-free RNA for the detection of colorectal cancer: From transcriptome marker selection to targeted validation

Emmalee J. Northrop-Albrecht, Chung Wah Wu, Calise K. Berger, William R. Taylor, Patrick H. Foote, Karen A. Doering, Anna M. Gonser, Aditya Bhagwate, Zhifu Sun, Douglas W. Mahoney, Kelli N. Burger, Lisa A. Boardman, John B. Kisiel

published 15 Aug 2024

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