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Sequencing techniques

Rapidly obtaining genome sequence of Severe Fever with Thrombocytopenia Syndrome virus directly from clinical serum specimen using long amplicon based nanopore sequencing workflow

Tingting Tian, Yanhan Wen, [ ... ], Mifang Liang

Identification of potential riboswitch elements in Homo sapiens mRNA 5’UTR sequences using positive-unlabeled machine learning

William S Raymond, Jacob DeRoo, Brian Munsky

Reliable RNA-seq analysis from FFPE specimens as a means to accelerate cancer-related health disparities research

Mitchell J. Frederick, Dannelys Perez-Bello, [ ... ], Vlad C. Sandulache

Insights into the implementation of a whole genome sequencing report form (SRF) to reduce nosocomial SARS-CoV-2 in UK hospitals within an unfolding pandemic: A qualitative process evaluation using normalisation process theory

Ruth Leiser, Julie McLeod, [ ... ], Paul Flowers

Identifying putative substrates of Calpain-15 in neurodevelopment

Congyao Zha, Ally Huang, [ ... ], Wayne S. Sossin

Optimizing lipocalin sequence classification with ensemble deep learning models

Yonglin Zhang, Lezheng Yu, [ ... ], Jiesi Luo

Trop-2 expression in non–small cell lung cancer

Peiwen Kuo, Emon Elboudwarej, [ ... ], Juliane M. Jürgensmeier

Mapping the temporal transcriptomic signature of a viral pathogen through CAGE and nanopore sequencing

Dóra Tombácz, Balázs Kakuk, [ ... ], Zsolt Boldogkői

Examining the bacterial diversity including extracellular vesicles in air and soil: implications for human health

Hyunjun Yun, Ji Hoon Seo, Yoon-Keun Kim, Jinho Yang

Deubiquitination of epidermal growth factor receptor by ubiquitin-specific peptidase 54 enhances drug sensitivity to gefitinib in gefitinib-resistant non-small cell lung cancer cells

Mi Seong Kim, Min Seuk Kim

The impact of software and criteria on the selection of best-fit nucleotide substitution models for molecular evolutionary genetic analysis

Xingguang Li, Olayinka Sunday Okoh, Nídia Sequeira Trovão

A method for PCR-free library preparation for sequencing palaeogenomes

Kirstin Henneberger, Axel Barlow, [ ... ], Johanna L. A. Paijmans

mRNA extracted from frozen buffy coat samples stored long term in tubes with no RNA preservative shows promise for downstream sequencing analyses

Erik Bovinder Ylitalo, Linda Vidman, Sophia Harlid, Bethany Van Guelpen

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