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Sequence motif analysis

Modeling the Quantitative Specificity of DNA-Binding Proteins from Example Binding Sites

Dana S. F. Homsi, Vineet Gupta, Gary D. Stormo

published 25 Aug 2009

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Integrated Expression Profiling and ChIP-seq Analyses of the Growth Inhibition Response Program of the Androgen Receptor

Biaoyang Lin, Jun Wang, Xu Hong, Xiaowei Yan, Daehee Hwang, Ji-Hoon Cho, Danielle Yi, Angelita G. Utleg, Xuefeng Fang, Dustin E. Schones, Keji Zhao, Gilbert S. Omenn, Leroy Hood

published 11 Aug 2009

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A Novel Putative miRNA Target Enhancer Signal

Thorsten Schmidt, Hans-Werner Mewes, Volker Stümpflen

published 31 Jul 2009

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Identification of Essential Sequences for Cellular Localization in BRMS1 Metastasis Suppressor

José Rivera, Diego Megías, Carolina Navas, Jerónimo Bravo

published 30 Jul 2009

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A Novel Human Tectonin Protein with Multivalent β-Propeller Folds Interacts with Ficolin and Binds Bacterial LPS

Diana Hooi Ping Low, Zhiwei Ang, Quan Yuan, Vladimir Frecer, Bow Ho, Jianzhu Chen, Jeak Ling Ding

published 16 Jul 2009

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Targeted Resequencing and Analysis of the Diamond-Blackfan Anemia Disease Locus RPS19

Alvaro Martinez Barrio, Oskar Eriksson, Jitendra Badhai, Anne-Sophie Fröjmark, Erik Bongcam-Rudloff, Niklas Dahl, Jens Schuster

published 09 Jul 2009

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Evidence for the Concerted Evolution between Short Linear Protein Motifs and Their Flanking Regions

Claudia Chica, Francesca Diella, Toby J. Gibson

published 08 Jul 2009

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Patterns of Oligonucleotide Sequences in Viral and Host Cell RNA Identify Mediators of the Host Innate Immune System

Benjamin D. Greenbaum, Raul Rabadan, Arnold J. Levine

published 18 Jun 2009

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AllerHunter: A SVM-Pairwise System for Assessment of Allergenicity and Allergic Cross-Reactivity in Proteins

Hon Cheng Muh, Joo Chuan Tong, Martti T. Tammi

published 10 Jun 2009

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Fido, a Novel AMPylation Domain Common to Fic, Doc, and AvrB

Lisa N. Kinch, Melanie L. Yarbrough, Kim Orth, Nick V. Grishin

published 05 Jun 2009

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Evolution of Alternative Splicing Regulation: Changes in Predicted Exonic Splicing Regulators Are Not Associated with Changes in Alternative Splicing Levels in Primates

Manuel Irimia, Jakob Lewin Rukov, Scott William Roy

published 04 Jun 2009

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Gene Classification Based on Amino Acid Motifs and Residues: The DLX (distal-less) Test Case

Nuno A. Fonseca, Cristina P. Vieira, Jorge Vieira

published 01 Jun 2009

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Regulatory Elements within the Prodomain of Falcipain-2, a Cysteine Protease of the Malaria Parasite Plasmodium falciparum

Kailash C. Pandey, David T. Barkan, Andrej Sali, Philip J. Rosenthal

published 27 May 2009

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