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Sequence motif analysis

Tiling Array Analysis of UV Treated Escherichia coli Predicts Novel Differentially Expressed Small Peptides

Gard O. S. Thomassen, Ragnhild Weel-Sneve, Alexander D. Rowe, James A. Booth, Jessica M. Lindvall, Karin Lagesen, Knut I. Kristiansen, Magnar Bjørås, Torbjørn Rognes

published 23 Dec 2010

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A Novel HMM-Based Method for Detecting Enriched Transcription Factor Binding Sites Reveals RUNX3 as a Potential Target in Pancreatic Cancer Biology

Liron Levkovitz, Nir Yosef, Marvin C. Gershengorn, Eytan Ruppin, Roded Sharan, Yoram Oron

published 22 Dec 2010

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Phosphorylation-Dependent Protein Interaction with Trypanosoma brucei 14-3-3 Proteins that Display Atypical Target Recognition

Masahiro Inoue, Kouichi Yasuda, Haruki Uemura, Natsumi Yasaka, Hiroshi Inoue, Yoshitatsu Sei, Nobuo Horikoshi, Toshihide Fukuma

published 21 Dec 2010

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Neural Correlates of Experience-Induced Deficits in Learned Vocal Communication

Isabelle George, Sandrine Alcaix, Laurence Henry, Jean-Pierre Richard, Hugo Cousillas, Martine Hausberger

published 16 Dec 2010

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Efficient Double Fragmentation ChIP-seq Provides Nucleotide Resolution Protein-DNA Binding Profiles

Michal Mokry, Pantelis Hatzis, Ewart de Bruijn, Jan Koster, Rogier Versteeg, Jurian Schuijers, Marc van de Wetering, Victor Guryev, Hans Clevers, Edwin Cuppen

published 30 Nov 2010

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Symmetric Key Structural Residues in Symmetric Proteins with Beta-Trefoil Fold

Jianhui Feng, Mingfeng Li, Yanzhao Huang, Yi Xiao

published 30 Nov 2010

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Helicobacter pylori from Peruvian Amerindians: Traces of Human Migrations in Strains from Remote Amazon, and Genome Sequence of an Amerind Strain

Dangeruta Kersulyte, Awdhesh Kalia, Robert H. Gilman, Melissa Mendez, Phabiola Herrera, Lilia Cabrera, Billie Velapatiño, Jacqueline Balqui, Freddy Paredes Puente de la Vega, Carlos A. Rodriguez Ulloa, Jaime Cok, Catherine C. Hooper, Giedrius Dailide, Sravya Tamma, Douglas E. Berg

published 29 Nov 2010

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A Bayesian Search for Transcriptional Motifs

Andrew K. Miller, Cristin G. Print, Poul M. F. Nielsen, Edmund J. Crampin

published 18 Nov 2010

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Phospholipase D Family Member 4, a Transmembrane Glycoprotein with No Phospholipase D Activity, Expression in Spleen and Early Postnatal Microglia

Fumio Yoshikawa, Yoshiko Banno, Yoshinori Otani, Yoshihide Yamaguchi, Yuko Nagakura-Takagi, Noriyuki Morita, Yumi Sato, Chihiro Saruta, Hirozumi Nishibe, Tetsushi Sadakata, Yo Shinoda, Kanehiro Hayashi, Yuriko Mishima, Hiroko Baba, Teiichi Furuichi

published 11 Nov 2010

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Structural Relationships in the Lysozyme Superfamily: Significant Evidence for Glycoside Hydrolase Signature Motifs

Alexandre Wohlkönig, Joëlle Huet, Yvan Looze, René Wintjens

published 09 Nov 2010

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In Vitro HIV-1 Selective Integration into the Target Sequence and Decoy-Effect of the Modified Sequence

Tatsuaki Tsuruyama, Tonau Nakai, Takuya Hiratsuka, Guang Jin, Takuro Nakamura, Kenichi Yoshikawa

published 04 Nov 2010

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The C-Terminal Domain of the MutL Homolog from Neisseria gonorrhoeae Forms an Inverted Homodimer

Sivakumar Namadurai, Deepti Jain, Dhananjay S. Kulkarni, Chaitanya R. Tabib, Peter Friedhoff, Desirazu N. Rao, Deepak T. Nair

published 28 Oct 2010

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Profiling Y561-Dependent and -Independent Substrates of CSF-1R in Epithelial Cells

Melodie L. Knowlton, Laura M. Selfors, Carolyn N. Wrobel, Ting-Lei Gu, Bryan A. Ballif, Steven P. Gygi, Roberto Polakiewicz, Joan S. Brugge

published 26 Oct 2010

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