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Sequence motif analysis

MDD-Palm: Identification of protein S-palmitoylation sites with substrate motifs based on maximal dependence decomposition

Shun-Long Weng, Hui-Ju Kao, Chien-Hsun Huang, Tzong-Yi Lee

IpiRId: Integrative approach for piRNA prediction using genomic and epigenomic data

Anouar Boucheham, Vivien Sommard, [ ... ], Fariza Tahi

Characterization of the regulation of a plant polysaccharide utilization operon and its role in biofilm formation in Bacillus subtilis

Cameron Habib, Yiyang Yu, [ ... ], Yunrong Chai

Genome-wide analysis of DWD proteins in soybean (Glycine max): Significance of Gm08DWD and GmMYB176 interaction in isoflavonoid biosynthesis

Shaomin Bian, Xuyan Li, [ ... ], Sangeeta Dhaubhadel

Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing

Alexandra Stoll, Dörte Harpke, [ ... ], Dietmar Quandt

SeqEnrich: A tool to predict transcription factor networks from co-expressed Arabidopsis and Brassica napus gene sets

Michael G. Becker, Philip L. Walker, Nadège C. Pulgar-Vidal, Mark F. Belmonte

Sequence statistics of tertiary structural motifs reflect protein stability

Fan Zheng, Gevorg Grigoryan

Validating regulatory predictions from diverse bacteria with mutant fitness data

Shiori Sagawa, Morgan N. Price, Adam M. Deutschbauer, Adam P. Arkin

A technique for setting analytical thresholds in massively parallel sequencing-based forensic DNA analysis

Brian Young, Jonathan L. King, Bruce Budowle, Luigi Armogida

Acetyl group coordinated progression through the catalytic cycle of an arylalkylamine N-acetyltransferase

Adam A. Aboalroub, Ashleigh B. Bachman, [ ... ], Ioannis Gelis

Molecular identification of transmembrane protein 68 as an endoplasmic reticulum-anchored and brain-specific protein

Ping’an Chang, Christoph Heier, [ ... ], Quan Sun

A computational method for prediction of matrix proteins in endogenous retroviruses

Yucheng Ma, Ruiling Liu, [ ... ], Xinman Zhang

45S rDNA external transcribed spacer organization reveals new phylogenetic relationships in Avena genus

Joana Rodrigues, Wanda Viegas, Manuela Silva

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