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Sequence motif analysis

Identification of LAG3 high affinity aptamers by HT-SELEX and Conserved Motif Accumulation (CMA)

Mario Martínez Soldevilla, Sandra Hervas, Helena Villanueva, Teresa Lozano, Obdulia Rabal, Julen Oyarzabal, Juan José Lasarte, Maurizio Bendandi, Susana Inoges, Ascensión López-Díaz de Cerio, Fernando Pastor

published 21 Sep 2017

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Identifying novel transcription factors involved in the inflammatory response by using binding site motif scanning in genomic regions defined by histone acetylation

Peter S. Askovich, Stephen A. Ramsey, Alan H. Diercks, Kathleen A. Kennedy, Theo A. Knijnenburg, Alan Aderem

published 18 Sep 2017

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Development of EST-SSR markers in flowering Chinese cabbage (Brassica campestris L. ssp. chinensis var. utilis Tsen et Lee) based on de novo transcriptomic assemblies

Jingfang Chen, Ronghua Li, Yanshi Xia, Guihua Bai, Peiguo Guo, Zhiliang Wang, Hua Zhang, Kadambot H. M. Siddique

published 13 Sep 2017

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Comprehensive analysis of amino acid sequence diversity at the F protein cleavage site of Newcastle disease virus in fusogenic activity

Yanhong Wang, Wanqi Yu, Na Huo, Wenbin Wang, Yuanyuan Guo, Qiaolin Wei, Xinglong Wang, Shuxia Zhang, Zengqi Yang, Sa Xiao

published 01 Sep 2017

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TSS-Seq analysis of low pH-induced gene expression in intercalated cells in the renal collecting duct

Yuichiro Izumi, Hideki Inoue, Yushi Nakayama, Koji Eguchi, Yukiko Yasuoka, Naomi Matsuo, Hiroshi Nonoguchi, Yutaka Kakizoe, Takashige Kuwabara, Masashi Mukoyama

published 31 Aug 2017

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Structural characterisation of TNRC6A nuclear localisation signal in complex with importin-alpha

Jessica J. Chaston, Alastair Gordon Stewart, Mary Christie

published 24 Aug 2017

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Sequence-structure relationships, expression profiles, and disease-associated mutations in the paralogs of phosphoglucomutase 1

Andrew G. Muenks, Kyle M. Stiers, Lesa J. Beamer

published 24 Aug 2017

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Analysis of repetitive amino acid motifs reveals the essential features of spider dragline silk proteins

Ali D. Malay, Kazuharu Arakawa, Keiji Numata

published 23 Aug 2017

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Phylogenetic analysis of the diacylglycerol kinase family of proteins and identification of multiple highly-specific conserved inserts and deletions within the catalytic domain that are distinctive characteristics of different classes of DGK homologs

Radhey S. Gupta, Richard M. Epand

published 22 Aug 2017

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Computational and experimental analysis of short peptide motifs for enzyme inhibition

Jinglin Fu, Luca Larini, Anthony J. Cooper, John W. Whittaker, Azka Ahmed, Junhao Dong, Minyoung Lee, Ting Zhang

published 15 Aug 2017

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The nucleoid protein Dps binds genomic DNA of Escherichia coli in a non-random manner

S. S. Antipov, M. N. Tutukina, E. V. Preobrazhenskaya, F. A. Kondrashov, M. V. Patrushev, S. V. Toshchakov, I. Dominova, U. S. Shvyreva, V. V. Vrublevskaya, O. S. Morenkov, N. A. Sukharicheva, V. V. Panyukov, O. N. Ozoline

published 11 Aug 2017

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Two populations of less-virulent Helicobacter pylori genotypes in Bangladesh

Hafeza Aftab, Muhammad Miftahussurur, Phawinee Subsomwong, Faruque Ahmed, A. K. Azad Khan, Takashi Matsumoto, Rumiko Suzuki, Yoshio Yamaoka

published 10 Aug 2017

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Engineering double-stranded RNA binding activity into the Drosha double-stranded RNA binding domain results in a loss of microRNA processing function

Joshua C. Kranick, Durga M. Chadalavada, Debashish Sahu, Scott A. Showalter

published 08 Aug 2017

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