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Sequence motif analysis

Sequencing, genome analysis and prevalence of a cytorhabdovirus discovered in Carica papaya

Andrés X. Medina-Salguero, Juan F. Cornejo-Franco, Samuel Grinstead, Dimitre Mollov, Joseph D. Mowery, Francisco Flores, Diego F. Quito-Avila

published 20 Jun 2019

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Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

Rajiv Movva, Peyton Greenside, Georgi K. Marinov, Surag Nair, Avanti Shrikumar, Anshul Kundaje

published 17 Jun 2019

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RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression

Collin A. O’Leary, Ryan J. Andrews, Van S. Tompkins, Jonathan L. Chen, Jessica L. Childs-Disney, Matthew D. Disney, Walter N. Moss

published 17 Jun 2019

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Identification of inhibitors of an unconventional Trypanosoma brucei kinetochore kinase

Leah S. Torrie, Fabio Zuccotto, David A. Robinson, David W. Gray, Ian H. Gilbert, Manu De Rycker

published 31 May 2019

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Molecular characterization and expression dynamics of MTP genes under various spatio-temporal stages and metal stress conditions in rice

Hasthi Ram, Amandeep Kaur, Nishu Gandass, Shweta Singh, Rupesh Deshmukh, Humira Sonah, Tilak Raj Sharma

published 28 May 2019

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The biosynthetic pathway to ossamycin, a macrocyclic polyketide bearing a spiroacetal moiety

Oksana Bilyk, Markiyan Samborskyy, Peter F. Leadlay

published 30 Apr 2019

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Genome-wide identification and gene expression pattern of ABC transporter gene family in Capsicum spp.

Carlos Lopez-Ortiz, Sudip Kumar Dutta, Purushothaman Natarajan, Yadira Peña-Garcia, Venkata Abburi, Thangasamy Saminathan, Padma Nimmakayala, Umesh K. Reddy

published 30 Apr 2019

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Prediction of binding property of RNA-binding proteins using multi-sized filters and multi-modal deep convolutional neural network

Taesu Chung, Dongsup Kim

published 26 Apr 2019

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Specific interaction of zinc finger protein Com with RNA and the crystal structure of a self-complementary RNA duplex recognized by Com

Martyna Nowacka, Humberto Fernandes, Agnieszka Kiliszek, Agata Bernat, Grzegorz Lach, Janusz M. Bujnicki

published 25 Apr 2019

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Identification of evolutionarily conserved downstream core promoter elements required for the transcriptional regulation of Fushi tarazu target genes

Hila Shir-Shapira, Anna Sloutskin, Orit Adato, Avital Ovadia-Shochat, Diana Ideses, Yonathan Zehavi, George Kassavetis, James T. Kadonaga, Ron Unger, Tamar Juven-Gershon

published 18 Apr 2019

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KSHV lytic proteins K-RTA and K8 bind to cellular and viral chromatin to modulate gene expression

Rajeev Kaul, Pravinkumar Purushothaman, Timsy Uppal, Subhash C. Verma

published 18 Apr 2019

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Conserved motifs in nuclear genes encoding predicted mitochondrial proteins in Trypanosoma cruzi

Lorena Becco, Pablo Smircich, Beatriz Garat

published 09 Apr 2019

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DNA aptamers for the recognition of HMGB1 from Plasmodium falciparum

Diego F. Joseph, Jose A. Nakamoto, Oscar Andree Garcia Ruiz, Katherin Peñaranda, Ana Elena Sanchez-Castro, Pablo Soriano Castillo, Pohl Milón

published 09 Apr 2019

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