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Sequence motif analysis

dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

Jianhong Ou, Haibo Liu, Niraj K. Nirala, Alexey Stukalov, Usha Acharya, Michael R. Green, Lihua Julie Zhu

published 06 Nov 2020

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Emergence of highly pathogenic H5N2 and H7N1 influenza A viruses from low pathogenic precursors by serial passage in ovo

Agnes Tinuke Laleye, Celia Abolnik

published 08 Oct 2020

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Development of a universal RT-PCR assay for grapevine vitiviruses

Alfredo Diaz-Lara, Teresa M. Erickson, Deborah Golino, Maher Al Rwahnih

published 22 Sep 2020

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The rice NLR pair Pikp-1/Pikp-2 initiates cell death through receptor cooperation rather than negative regulation

Rafał Zdrzałek, Sophien Kamoun, Ryohei Terauchi, Hiromasa Saitoh, Mark J. Banfield

published 15 Sep 2020

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MITF and TFEB cross-regulation in melanoma cells

Josué Ballesteros-Álvarez, Ramile Dilshat, Valerie Fock, Katrín Möller, Ludwig Karl, Lionel Larue, Margrét Helga Ögmundsdóttir, Eiríkur Steingrímsson

published 03 Sep 2020

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Genome-wide identification and expression profiling of the carotenoid cleavage dioxygenase (CCD) gene family in Brassica napus L

Xin-Tong Zhou, Le-Dong Jia, Mou-Zheng Duan, Xue Chen, Cai-Lin Qiao, Jin-Qi Ma, Chao Zhang, Fu-Yu Jing, Sheng-Sen Zhang, Bo Yang, Li-Yuan Zhang, Jia-Na Li

published 03 Sep 2020

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Multi-agent approach to sequence structure simulation in the RNA World hypothesis

Jaroslaw Synak, Agnieszka Rybarczyk, Jacek Blazewicz

published 28 Aug 2020

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Genome-wide Identification of WRKY transcription factor family members in sorghum (Sorghum bicolor (L.) moench)

Elamin Hafiz Baillo, Muhammad Sajid Hanif, Yinghui Guo, Zhengbin Zhang, Ping Xu, Soad Ali Algam

published 17 Aug 2020

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Mutations in m⁶A consensus motifs are suppressed in the m⁶A modified genes in human cancer cells

Mingzi An, Huiyun Wang, Yingqian Zhu

published 13 Aug 2020

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Conserved sequence motifs in the abiotic stress response protein late embryogenesis abundant 3

Karamjeet K. Singh, Steffen P. Graether

published 06 Aug 2020

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Identification and characterisation of thiamine pyrophosphate (TPP) riboswitch in Elaeis guineensis

Atiqah Subki, Chai Ling Ho, Nur Farhah Nabihan Ismail, Aisamuddin Ardi Zainal Abidin, Zetty Norhana Balia Yusof

published 29 Jul 2020

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Calmodulin-binding transcription activator (CAMTA) genes family: Genome-wide survey and phylogenetic analysis in flax (Linum usitatissimum)

Essa Ali, Mohammad Ammar Raza, Ming Cai, Nazim Hussain, Ahmad Naeem Shahzad, Mubshar Hussain, Murtaza Ali, Syed Asad Hussain Bukhari, Peilong Sun

published 23 Jul 2020

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Predicting gene regulatory regions with a convolutional neural network for processing double-strand genome sequence information

Koh Onimaru, Osamu Nishimura, Shigehiro Kuraku

published 23 Jul 2020

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