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Sequence motif analysis

Comparative 3'UTR Analysis Allows Identification of Regulatory Clusters that Drive Eph/ephrin Expression in Cancer Cell Lines

Jennifer Winter, Stefan Roepcke, Sven Krause, Eva-Christina Müller, Albrecht Otto, Martin Vingron, Susann Schweiger

published 23 Jul 2008

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The Actinome of Dictyostelium discoideum in Comparison to Actins and Actin-Related Proteins from Other Organisms

Jayabalan M. Joseph, Petra Fey, Nagendran Ramalingam, Xiao I. Liu, Meino Rohlfs, Angelika A. Noegel, Annette Müller-Taubenberger, Gernot Glöckner, Michael Schleicher

published 09 Jul 2008

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CyclinPred: A SVM-Based Method for Predicting Cyclin Protein Sequences

Mridul K. Kalita, Umesh K. Nandal, Ansuman Pattnaik, Anandhan Sivalingam, Gowthaman Ramasamy, Manish Kumar, Gajendra P. S. Raghava, Dinesh Gupta

published 02 Jul 2008

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Contextual Specificity in Peptide-Mediated Protein Interactions

Amelie Stein, Patrick Aloy

published 02 Jul 2008

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A Regulatory Role for NBS1 in Strand-Specific Mutagenesis during Somatic Hypermutation

Likun Du, Deborah K. Dunn-Walters, Krystyna H. Chrzanowska, Tanja Stankovic, Ashwin Kotnis, Xin Li, Jiayi Lu, Gösta Eggertsen, Claire Brittain, Sergey W. Popov, Andrew R. Gennery, A. Malcolm R. Taylor, Qiang Pan-Hammarström

published 25 Jun 2008

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A Plasmodium falciparum Host-Targeting Motif Functions in Export during Blood Stage Infection of the Rodent Malarial Parasite Plasmodium berghei

Julia J. MacKenzie, Noé D. Gómez, Souvik Bhattacharjee, Shaina Mann, Kasturi Haldar

published 11 Jun 2008

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Functional Diversification of Paralogous Transcription Factors via Divergence in DNA Binding Site Motif and in Expression

Larry N. Singh, Sridhar Hannenhalli

published 04 Jun 2008

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Analysis of the EIAV Rev-Responsive Element (RRE) Reveals a Conserved RNA Motif Required for High Affinity Rev Binding in Both HIV-1 and EIAV

Jae-Hyung Lee, Gloria Culver, Susan Carpenter, Drena Dobbs

published 04 Jun 2008

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Highly Conserved Regimes of Neighbor-Base-Dependent Mutation Generated the Background Primary-Structural Heterogeneities along Vertebrate Chromosomes

Marcos A. Antezana, I. King Jordan

published 14 May 2008

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Mechanistic Insights into a Novel Exporter-Importer System of Mycobacterium tuberculosis Unravel Its Role in Trafficking of Iron

Aisha Farhana, Sandeep Kumar, Shailendra S. Rathore, Prahlad C. Ghosh, Nasreen Z. Ehtesham, Anil K. Tyagi, Seyed E. Hasnain

published 07 May 2008

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The Nod-Like Receptor (NLR) Family: A Tale of Similarities and Differences

Martina Proell, Stefan J. Riedl, Jörg H. Fritz, Ana M. Rojas, Robert Schwarzenbacher

published 30 Apr 2008

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The T7-Primer Is a Source of Experimental Bias and Introduces Variability between Microarray Platforms

Ron M. Kerkhoven, Daoud Sie, Marja Nieuwland, Mike Heimerikx, Jorma De Ronde, Wim Brugman, Arno Velds

published 23 Apr 2008

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Probabilistic Inference of Transcription Factor Binding from Multiple Data Sources

Harri Lähdesmäki, Alistair G. Rust, Ilya Shmulevich

published 26 Mar 2008

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