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Sequence motif analysis

Heuristic algorithms in evolutionary computation and modular organization of biological macromolecules: Applications to in vitro evolution

Alexander V. Spirov, Ekaterina M. Myasnikova

published 27 Jan 2022

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Calmodulin binds the N-terminus of the functional amyloid Orb2A inhibiting fibril formation

Maria A. Soria, Silvia A. Cervantes, Ansgar B. Siemer

published 13 Jan 2022

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Genome-wide promoter analysis, homology modeling and protein interaction network of Dehydration Responsive Element Binding (DREB) gene family in Solanum tuberosum

Qurat-ul ain-Ali, Nida Mushtaq, Rabia Amir, Alvina Gul, Muhammad Tahir, Faiza Munir

published 16 Dec 2021

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Genome-wide analysis of bZIP, BBR, and BZR transcription factors in Triticum aestivum

Arzoo Ahad, Roohi Aslam, Alvina Gul, Rabia Amir, Faiza Munir, Tuba Sharf Batool, Mahnoor Ilyas, Muhammad Sarwar, Muhammad Azhar Nadeem, Faheem Shehzad Baloch, Sajid Fiaz, Muhammad Abu Bakar Zia

published 30 Nov 2021

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Genome-wide survey and characterization of transcription factors in the silk gland of the silkworm, Bombyx mori

Yan Ma, Qiwei Sun, Lihua Huang, Qin Luo, Wenhui Zeng, Yao Ou, Jingwen Ma, Hanfu Xu

published 11 Nov 2021

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Sortase-mediated segmental labeling: A method for segmental assignment of intrinsically disordered regions in proteins

Kristina V. Boyko, Erin A. Rosenkranz, Derrick M. Smith, Heather L. Miears, Melissa Oueld es cheikh, Micah Z. Lund, Jeffery C. Young, Patrick N. Reardon, Mark Okon, Serge L. Smirnov, John M. Antos

published 28 Oct 2021

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Development of EST-SSR markers based on transcriptome and its validation in ginger (Zingiber officinale Rosc.)

Venugopal Vidya, Duraisamy Prasath, Mohandas Snigdha, Ramasamy Gobu, Charles Sona, Chandan Suravi Maiti

published 27 Oct 2021

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Genome-wide identification, structural and gene expression analysis of the nitrate transporters (NRTs) family in potato (Solanum tuberosum L.)

Jingying Zhang, Zhijun Han, Yue Lu, Yanfei Zhao, Yaping Wang, Jiayue Zhang, Haoran Ma, Yu Zhu Han

published 21 Oct 2021

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Qualitative lysine crotonylome analysis in the ovarian tissue of Harmonia axyridis (Pallas)

Changying Zheng, Lijuan Sun

published 18 Oct 2021

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Predicting PY motif-mediated protein-protein interactions in the Nedd4 family of ubiquitin ligases

A. Katherine Hatstat, Michael D. Pupi, Dewey G. McCafferty

published 12 Oct 2021

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Immunogenic amino acid motifs and linear epitopes of COVID-19 mRNA vaccines

Adam V. Wisnewski, Carrie A. Redlich, Jian Liu, Kathy Kamath, Queenie-Ann Abad, Richard F. Smith, Louis Fazen, Romero Santiago, Julian Campillo Luna, Brian Martinez, Elizabeth Baum-Jones, Rebecca Waitz, Winston A. Haynes, John C. Shon

published 09 Sep 2021

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Identification and in-silico characterization of taxadien-5α-ol-O-acetyltransferase (TDAT) gene in Corylus avellana L.

Mona Raeispour Shirazi, Sara Alsadat Rahpeyma, Sajad Rashidi Monfared, Jafar Zolala, Azadeh Lohrasbi-Nejad

published 27 Aug 2021

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Examination of the roles of a conserved motif in the PriA helicase in structure-specific DNA unwinding and processivity

Alexander T. Duckworth, Tricia A. Windgassen, James L. Keck

published 30 Jul 2021

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