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Sequence databases

Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

Thomas C. Jeffries, Justin R. Seymour, Jack A. Gilbert, Elizabeth A. Dinsdale, Kelly Newton, Sophie S. C. Leterme, Ben Roudnew, Renee J. Smith, Laurent Seuront, James G. Mitchell

published 23 Sep 2011

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CDinFusion – Submission-Ready, On-Line Integration of Sequence and Contextual Data

Wolfgang Hankeln, Norma Johanna Wendel, Jan Gerken, Jost Waldmann, Pier Luigi Buttigieg, Ivaylo Kostadinov, Renzo Kottmann, Pelin Yilmaz, Frank Oliver Glöckner

published 13 Sep 2011

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DNA Barcode Sequence Identification Incorporating Taxonomic Hierarchy and within Taxon Variability

Damon P. Little

published 16 Aug 2011

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Revealing Natural Relationships among Arbuscular Mycorrhizal Fungi: Culture Line BEG47 Represents Diversispora epigaea, Not Glomus versiforme

Arthur Schüßler, Manuela Krüger, Christopher Walker

published 11 Aug 2011

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Generation, Annotation and Analysis of First Large-Scale Expressed Sequence Tags from Developing Fiber of Gossypium barbadense L

Daojun Yuan, Lili Tu, Xianlong Zhang

published 28 Jul 2011

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Molecular Identification of Bacteria by Total Sequence Screening: Determining the Cause of Death in Ancient Human Subjects

Catherine Thèves, Alice Senescau, Stefano Vanin, Christine Keyser, François Xavier Ricaut, Anatoly N. Alekseev, Henri Dabernat, Bertrand Ludes, Richard Fabre, Eric Crubézy

published 13 Jul 2011

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Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

Rui Hou, Zhenmin Bao, Shan Wang, Hailin Su, Yan Li, Huixia Du, Jingjie Hu, Shi Wang, Xiaoli Hu

published 24 Jun 2011

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Remote Data Retrieval for Bioinformatics Applications: An Agent Migration Approach

Lei Gao, Hua Dai, Tong-Liang Zhang, Kuo-Chen Chou

published 20 Jun 2011

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Discovery of Protein Phosphorylation Motifs through Exploratory Data Analysis

Yi-Cheng Chen, Kripamoy Aguan, Chu-Wen Yang, Yao-Tsung Wang, Nikhil R. Pal, I-Fang Chung

published 25 May 2011

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The Sensitivity of Massively Parallel Sequencing for Detecting Candidate Infectious Agents Associated with Human Tissue

Richard A. Moore, René L. Warren, J. Douglas Freeman, Julia A. Gustavsen, Caroline Chénard, Jan M. Friedman, Curtis A. Suttle, Yongjun Zhao, Robert A. Holt

published 13 May 2011

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jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

Martin Jones, Anisah Ghoorah, Mark Blaxter

published 25 Apr 2011

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CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, Noah D. Firestone, Erin L. Gross, James M. DiFranco, Jori H. Hardman, Bastienne Vriesendorp, Russell A. Faust, Daniel A. Janies, Eugene J. Leys

published 22 Apr 2011

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Comparison of Antibody Repertoires Produced by HIV-1 Infection, Other Chronic and Acute Infections, and Systemic Autoimmune Disease

Felix Breden, Christa Lepik, Nancy S. Longo, Marinieve Montero, Peter E. Lipsky, Jamie K. Scott

published 30 Mar 2011

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