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Sequence databases

MGEx-Udb: A Mammalian Uterus Database for Expression-Based Cataloguing of Genes across Conditions, Including Endometriosis and Cervical Cancer

Akhilesh K. Bajpai, Sravanthi Davuluri, [ ... ], Kshitish K. Acharya

GHOSTM: A GPU-Accelerated Homology Search Tool for Metagenomics

Shuji Suzuki, Takashi Ishida, Ken Kurokawa, Yutaka Akiyama

DNA Barcode Goes Two-Dimensions: DNA QR Code Web Server

Chang Liu, Linchun Shi, [ ... ], Shilin Chen

Factors That Affect Large Subunit Ribosomal DNA Amplicon Sequencing Studies of Fungal Communities: Classification Method, Primer Choice, and Error

Teresita M. Porter, G. Brian Golding

MycoRRdb: A Database of Computationally Identified Regulatory Regions within Intergenic Sequences in Mycobacterial Genomes

Mohit Midha, Nirmal K. Prasad, Vaibhav Vindal

A Ranking System for Reference Libraries of DNA Barcodes: Application to Marine Fish Species from Portugal

Filipe O. Costa, Monica Landi, [ ... ], Gary R. Carvalho

PCR Primers for Metazoan Mitochondrial 12S Ribosomal DNA Sequences

Ryuji J. Machida, Matthew Kweskin, Nancy Knowlton

Annotation of the Transcriptome from Taenia pisiformis and Its Comparative Analysis with Three Taeniidae Species

Deying Yang, Yan Fu, [ ... ], Guangyou Yang

Finding a Needle in the Virus Metagenome Haystack - Micro-Metagenome Analysis Captures a Snapshot of the Diversity of a Bacteriophage Armoire

Jessica Ray, Michael Dondrup, [ ... ], Martha Clokie

Fingerprinting the Asterid Species Using Subtracted Diversity Array Reveals Novel Species-Specific Sequences

Nitin Mantri, Alexandra Olarte, [ ... ], Edwin C. K. Pang

microPIR: An Integrated Database of MicroRNA Target Sites within Human Promoter Sequences

Jittima Piriyapongsa, Chaiwat Bootchai, Chumpol Ngamphiw, Sissades Tongsima

Molecular Phylogeny of the Cyrtophorid Ciliates (Protozoa, Ciliophora, Phyllopharyngea)

Shan Gao, Jie Huang, Jiamei Li, Weibo Song

Using the RDP Classifier to Predict Taxonomic Novelty and Reduce the Search Space for Finding Novel Organisms

Yemin Lan, Qiong Wang, James R. Cole, Gail L. Rosen

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