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Sequence databases

Reverse Taxonomy for Elucidating Diversity of Insect-Associated Nematodes: A Case Study with Termites

Natsumi Kanzaki, Robin M. Giblin-Davis, Rudolf H. Scheffrahn, Hisatomo Taki, Alejandro Esquivel, Kerrie A. Davies, E. Allen Herre

published 28 Aug 2012

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Increasing Coverage of Transcription Factor Position Weight Matrices through Domain-level Homology

Brady Bernard, Vesteinn Thorsson, Hector Rovira, Ilya Shmulevich

published 27 Aug 2012

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Pitfalls of Establishing DNA Barcoding Systems in Protists: The Cryptophyceae as a Test Case

Kerstin Hoef-Emden

published 24 Aug 2012

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Phylogenetic Diversity and Environment-Specific Distributions of Glycosyl Hydrolase Family 10 Xylanases in Geographically Distant Soils

Guozeng Wang, Kun Meng, Huiying Luo, Yaru Wang, Huoqing Huang, Pengjun Shi, Peilong Yang, Zhifang Zhang, Bin Yao

published 17 Aug 2012

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Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies

Sotirios Vasileiadis, Edoardo Puglisi, Maria Arena, Fabrizio Cappa, Pier S. Cocconcelli, Marco Trevisan

published 06 Aug 2012

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Transcriptome Analysis and SSR/SNP Markers Information of the Blunt Snout Bream (Megalobrama amblycephala)

Zexia Gao, Wei Luo, Hong Liu, Cong Zeng, Xiaolian Liu, Shaokui Yi, Weimin Wang

published 06 Aug 2012

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Unique Alterations of an Ultraconserved Non-Coding Element in the 3′UTR of ZIC2 in Holoprosencephaly

Erich Roessler, Ping Hu, Sung-Kook Hong, Kshitij Srivastava, Blake Carrington, Raman Sood, Hanna Petrykowska, Laura Elnitski, Lucilene A. Ribeiro, Antonio Richieri-Costa, Benjamin Feldman, Ward F. Odenwald, Maximilian Muenke

published 31 Jul 2012

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Next-Generation Sequencing of the Porcine Skeletal Muscle Transcriptome for Computational Prediction of MicroRNA Gene Targets

Tara G. McDaneld, Tim P. L. Smith, Gregory P. Harhay, Ralph T. Wiedmann

published 27 Jul 2012

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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing

Anthony A. Fodor, Todd Z. DeSantis, Kristine M. Wylie, Jonathan H. Badger, Yuzhen Ye, Theresa Hepburn, Ping Hu, Erica Sodergren, Konstantinos Liolios, Heather Huot-Creasy, Bruce W. Birren, Ashlee M. Earl

published 26 Jul 2012

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A Comprehensive Evaluation of PCR Primers to Amplify the nifH Gene of Nitrogenase

John Christian Gaby, Daniel H. Buckley

published 25 Jul 2012

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High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

Hirokazu Toju, Akifumi S. Tanabe, Satoshi Yamamoto, Hirotoshi Sato

published 12 Jul 2012

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Transcriptome Analysis of the Octopus vulgaris Central Nervous System

Xiang Zhang, Yong Mao, Zixia Huang, Meng Qu, Jun Chen, Shaoxiong Ding, Jingni Hong, Tiantian Sun

published 29 Jun 2012

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An Improvement of Shotgun Proteomics Analysis by Adding Next-Generation Sequencing Transcriptome Data in Orange

Jiaping Song, Renjie Sun, Dazhi Li, Fengji Tan, Xin Li, Pingping Jiang, Xinjie Huang, Liang Lin, Ziniu Deng, Yong Zhang

published 29 Jun 2012

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