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Sequence databases

The Human Gut Chip “HuGChip”, an Explorative Phylogenetic Microarray for Determining Gut Microbiome Diversity at Family Level

William Tottey, Jeremie Denonfoux, [ ... ], Jean-François Brugère

Protein Clustering and RNA Phylogenetic Reconstruction of the Influenza a Virus NS1 Protein Allow an Update in Classification and Identification of Motif Conservation

Edgar E. Sevilla-Reyes, David A. Chavaro-Pérez, [ ... ], Teresa Santos-Mendoza

No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Katarzyna Zaremba-Niedźwiedzka, Siv G. E. Andersson

Equivalent Indels – Ambiguous Functional Classes and Redundancy in Databases

Jens Assmus, Jürgen Kleffe, Armin O. Schmitt, Gudrun A. Brockmann

CLUSTOM: A Novel Method for Clustering 16S rRNA Next Generation Sequences by Overlap Minimization

Kyuin Hwang, Jeongsu Oh, [ ... ], Kyung Mo Kim

Filling Gaps in Biodiversity Knowledge for Macrofungi: Contributions and Assessment of an Herbarium Collection DNA Barcode Sequencing Project

Todd W. Osmundson, Vincent A. Robert, [ ... ], Matteo M. Garbelotto

MabsBase: A Mycobacterium abscessus Genome and Annotation Database

Hamed Heydari, Wei Yee Wee, [ ... ], Siew Woh Choo

Characterization of Novel Precursor miRNAs Using Next Generation Sequencing and Prediction of miRNA Targets in Atlantic Halibut

Teshome Tilahun Bizuayehu, Jorge M. O. Fernandes, Steinar D. Johansen, Igor Babiak

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences

Swee Hoe Ong, Vinutha Uppoor Kukkillaya, [ ... ], Niranjan Nagarajan

How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

Ingrid Parmentier, Jérôme Duminil, [ ... ], Olivier J. Hardy

Unveiling the Diet of Elusive Rainforest Herbivores in Next Generation Sequencing Era? The Tapir as a Case Study

Fabrice Hibert, Pierre Taberlet, [ ... ], Cécile Richard-Hansen

Construction of Customized Sub-Databases from NCBI-nr Database for Rapid Annotation of Huge Metagenomic Datasets Using a Combined BLAST and MEGAN Approach

Ke Yu, Tong Zhang

RNA-Seq Analysis of Cocos nucifera: Transcriptome Sequencing and De Novo Assembly for Subsequent Functional Genomics Approaches

Haikuo Fan, Yong Xiao, [ ... ], Haoru Tang

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