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Sequence databases

Characterization of novel lignocellulose-degrading enzymes from the porcupine microbiome using synthetic metagenomics

Mackenzie Thornbury, Jacob Sicheri, Patrick Slaine, Landon J. Getz, Emma Finlayson-Trick, Jamie Cook, Caroline Guinard, Nicholas Boudreau, David Jakeman, John Rohde, Craig McCormick

published 02 Jan 2019

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Direct fishing and eDNA metabarcoding for biomonitoring during a 3-year survey significantly improves number of fish detected around a South East Asian reservoir

Benjamin Gillet, Maud Cottet, Thibault Destanque, Kaoboun Kue, Stéphane Descloux, Vincent Chanudet, Sandrine Hughes

published 13 Dec 2018

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Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics

Roger Karlsson, Lucia Gonzales-Siles, Margarita Gomila, Antonio Busquets, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Hedvig E. Jakobsson, Anders Karlsson, Fredrik Boulund, Erik Kristiansson, Edward R. B. Moore

published 10 Dec 2018

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Porcine circovirus 2 (PCV-2) genotype update and proposal of a new genotyping methodology

Giovanni Franzo, Joaquim Segalés

published 06 Dec 2018

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An open-source k-mer based machine learning tool for fast and accurate subtyping of HIV-1 genomes

Stephen Solis-Reyes, Mariano Avino, Art Poon, Lila Kari

published 14 Nov 2018

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One-time-pad cryptography scheme based on a three-dimensional DNA self-assembly pyramid structure

Weiping Peng, Danhua Cheng, Cheng Song

published 06 Nov 2018

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Evaluation of the ribosomal DNA internal transcribed spacer (ITS), specifically ITS1 and ITS2, for the analysis of fungal diversity by deep sequencing

Rui-Heng Yang, Jin-He Su, Jun-Jun Shang, Ying-Ying Wu, Yan Li, Da-Peng Bao, Yi-Jian Yao

published 25 Oct 2018

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Transcriptomic analysis of the salivary gland of medicinal leech Hirudo nipponia

Zenghui Lu, Ping Shi, Huajian You, Yanqi Liu, Shijiang Chen

published 19 Oct 2018

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miRWalk: An online resource for prediction of microRNA binding sites

Carsten Sticht, Carolina De La Torre, Alisha Parveen, Norbert Gretz

published 18 Oct 2018

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A most wanted list of conserved microbial protein families with no known domains

Stacia K. Wyman, Aram Avila-Herrera, Stephen Nayfach, Katherine S. Pollard

published 17 Oct 2018

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Characterization of novel glycosyl hydrolases discovered by cell wall glycan directed monoclonal antibody screening and metagenome analysis of maize aerial root mucilage

Tania Pozzo, Shawn M. Higdon, Sivakumar Pattathil, Michael G. Hahn, Alan B. Bennett

published 26 Sep 2018

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Molecular analysis of the chromosomal 16S rRNA gene and vapA plasmid gene of Polish field strains of R. equi

Marcin Kalinowski, Zbigniew Grądzki, Łukasz Jarosz, Łukasz Adaszek

published 25 Sep 2018

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High frequency of mutations in 'dyshormonogenesis genes' in severe congenital hypothyroidism

Nina Makretskaya, Olga Bezlepkina, Anna Kolodkina, Alexey Kiyaev, Evgeny V. Vasilyev, Vasily Petrov, Svetlana Kalinenkova, Oleg Malievsky, Ivan I. Dedov, Anatoly Tiulpakov

published 21 Sep 2018

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