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Sequence analysis

Polyploidization as a Retraction Force in Plant Genome Evolution: Sequence Rearrangements in Triticale

Miguel Bento, H. Sofia Pereira, Margarida Rocheta, Perry Gustafson, Wanda Viegas, Manuela Silva

published 02 Jan 2008

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A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety

Riccardo Velasco, Andrey Zharkikh, Michela Troggio, Dustin A. Cartwright, Alessandro Cestaro, Dmitry Pruss, Massimo Pindo, Lisa M. FitzGerald, Silvia Vezzulli, Julia Reid, Giulia Malacarne, Diana Iliev, Giuseppina Coppola, Bryan Wardell, Diego Micheletti, Teresita Macalma, Marco Facci, Jeff T. Mitchell, Michele Perazzolli, Glenn Eldredge, Pamela Gatto, Rozan Oyzerski, Marco Moretto, Natalia Gutin, Marco Stefanini, Yang Chen, Cinzia Segala, Christine Davenport, Lorenzo Demattè, Amy Mraz, Juri Battilana, Keith Stormo, Fabrizio Costa, Quanzhou Tao, Azeddine Si-Ammour, Tim Harkins, Angie Lackey, Clotilde Perbost, Bruce Taillon, Alessandra Stella, Victor Solovyev, Jeffrey A. Fawcett, Lieven Sterck, Klaas Vandepoele, Stella M. Grando, Stefano Toppo, Claudio Moser, Jerry Lanchbury, Robert Bogden, Mark Skolnick, Vittorio Sgaramella, Satish K. Bhatnagar, Paolo Fontana, Alexander Gutin, Yves Van de Peer, Francesco Salamini, Roberto Viola

published 19 Dec 2007

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Identification of Novel Drosophila melanogaster MicroRNAs

Thomas Sandmann, Stephen M. Cohen

published 28 Nov 2007

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An Intronic Signal for Alternative Splicing in the Human Genome

Necat Havlioglu, Jun Wang, Kazuo Fushimi, Maria D. Vibranovski, Zhengyan Kan, Warren Gish, Alexei Fedorov, Manyuan Long, Jane Y. Wu

published 28 Nov 2007

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Evolutionarily Conserved Protein Sequences of Influenza A Viruses, Avian and Human, as Vaccine Targets

A. T. Heiny, Olivo Miotto, Kellathur N. Srinivasan, Asif M. Khan, G. L. Zhang, Vladimir Brusic, Tin Wee Tan, J. Thomas August

published 21 Nov 2007

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Putative Zinc Finger Protein Binding Sites Are Over-Represented in the Boundaries of Methylation-Resistant CpG Islands in the Human Genome

Shicai Fan, Fang Fang, Xuegong Zhang, Michael Q. Zhang

published 21 Nov 2007

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Rapid Changes in Gene Expression Dynamics in Response to Superoxide Reveal SoxRS-Dependent and Independent Transcriptional Networks

Jeffrey L. Blanchard, Wei-Yun Wholey, Erin M. Conlon, Pablo J. Pomposiello

published 14 Nov 2007

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NF-κB/Rel-Mediated Regulation of the Neural Fate in Drosophila

Savita Ayyar, Daniela Pistillo, Manuel Calleja, Anna Brookfield, Kelly Gittins, Claire Goldstone, Pat Simpson

published 14 Nov 2007

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DNA Barcoding in the Cycadales: Testing the Potential of Proposed Barcoding Markers for Species Identification of Cycads

Chodon Sass, Damon P. Little, Dennis Wm. Stevenson, Chelsea D. Specht

published 07 Nov 2007

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Fine-Tuning Enhancer Models to Predict Transcriptional Targets across Multiple Genomes

Stein Aerts, Jacques van Helden, Olivier Sand, Bassem A. Hassan

published 07 Nov 2007

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Identification and Classification of Hubs in Brain Networks

Olaf Sporns, Christopher J. Honey, Rolf Kötter

published 17 Oct 2007

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Nullomers: Really a Matter of Natural Selection?

Claudia Acquisti, George Poste, David Curtiss, Sudhir Kumar

published 10 Oct 2007

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Conservation, Variability and the Modeling of Active Protein Kinases

James D. R. Knight, Bin Qian, David Baker, Rashmi Kothary

published 03 Oct 2007

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