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Sequence alignment

SparkBWA: Speeding Up the Alignment of High-Throughput DNA Sequencing Data

José M. Abuín, Juan C. Pichel, Tomás F. Pena, Jorge Amigo

published 16 May 2016

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GapBlaster—A Graphical Gap Filler for Prokaryote Genomes

Pablo H. C. G. de Sá, Fábio Miranda, Adonney Veras, Diego Magalhães de Melo, Siomar Soares, Kenny Pinheiro, Luis Guimarães, Vasco Azevedo, Artur Silva, Rommel T. J. Ramos

published 12 May 2016

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Genome Sequencing and Analysis of Catopsilia pomona nucleopolyhedrovirus: A Distinct Species in Group I Alphabaculovirus

Jun Wang, Zheng Zhu, Lei Zhang, Dianhai Hou, Manli Wang, Basil Arif, Zheng Kou, Hualin Wang, Fei Deng, Zhihong Hu

published 11 May 2016

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Phylogenetic Analyses of Armillaria Reveal at Least 15 Phylogenetic Lineages in China, Seven of Which Are Associated with Cultivated Gastrodia elata

Ting Guo, Han Chen Wang, Wan Qiu Xue, Jun Zhao, Zhu L. Yang

published 03 May 2016

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Identification and Characterization of Two Novel RNA Viruses from Anopheles gambiae Species Complex Mosquitoes

Guillaume Carissimo, Karin Eiglmeier, Julie Reveillaud, Inge Holm, Mawlouth Diallo, Diawo Diallo, Amélie Vantaux, Saorin Kim, Didier Ménard, Sovannaroth Siv, Eugeni Belda, Emmanuel Bischoff, Christophe Antoniewski, Kenneth D. Vernick

published 03 May 2016

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An Improved microRNA Annotation of the Canine Genome

Luca Penso-Dolfin, Ross Swofford, Jeremy Johnson, Jessica Alföldi, Kerstin Lindblad-Toh, David Swarbreck, Simon Moxon, Federica Di Palma

published 27 Apr 2016

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De Novo Adult Transcriptomes of Two European Brittle Stars: Spotlight on Opsin-Based Photoreception

Jérôme Delroisse, Jérôme Mallefet, Patrick Flammang

published 27 Apr 2016

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Blind Flight? A New Troglobiotic Orthoclad (Diptera, Chironomidae) from the Lukina Jama – Trojama Cave in Croatia

Trond Andersen, Viktor Baranov, Linn Katrine Hagenlund, Marija Ivković, Gunnar Mikalsen Kvifte, Martina Pavlek

published 27 Apr 2016

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Characterization of the Small RNA Transcriptome of the Marine Coccolithophorid, Emiliania huxleyi

Xiaoyu Zhang, Jaime Gamarra, Steven Castro, Estela Carrasco, Aaron Hernandez, Thomas Mock, Ahmad R. Hadaegh, Betsy A. Read

published 21 Apr 2016

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New Cysteine-Rich Ice-Binding Protein Secreted from Antarctic Microalga, Chloromonas sp.

Woongsic Jung, Robert L. Campbell, Yunho Gwak, Jong Im Kim, Peter L. Davies, EonSeon Jin

published 20 Apr 2016

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Genomic Features and Niche-Adaptation of Enterococcus faecium Strains from Korean Soybean-Fermented Foods

Eun Bae Kim, Gwi-Deuk Jin, Jun-Yeong Lee, Yun-Jaie Choi

published 12 Apr 2016

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Properties and Phylogeny of 76 Families of Bacterial and Eukaryotic Organellar Outer Membrane Pore-Forming Proteins

Bhaskara L. Reddy, Milton H. Saier Jr.

published 11 Apr 2016

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Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics

Nicola Harrison, Richard J. Harrison, Catherine A. Kidner

published 08 Apr 2016

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