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Sequence alignment

Phylogenetic inference of Coxiella burnetii by 16S rRNA gene sequencing

Heather P. McLaughlin, Blake Cherney, Janetta R. Hakovirta, Rachael A. Priestley, Andrew Conley, Andrew Carter, David Hodge, Segaran P. Pillai, Linda M. Weigel, Gilbert J. Kersh, David Sue

published 29 Dec 2017

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RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

published 21 Dec 2017

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Single molecule sequencing of the M13 virus genome without amplification

Luyang Zhao, Liwei Deng, Gailing Li, Huan Jin, Jinsen Cai, Huan Shang, Yan Li, Haomin Wu, Weibin Xu, Lidong Zeng, Renli Zhang, Huan Zhao, Ping Wu, Zhiliang Zhou, Jiao Zheng, Pierre Ezanno, Andrew X. Yang, Qin Yan, Michael W. Deem, Jiankui He

published 18 Dec 2017

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Comparison of sequential multiplex PCR, sequetyping and whole genome sequencing for serotyping of Streptococcus pneumoniae

Florian Mauffrey, Éric Fournier, Walter Demczuk, Irene Martin, Michael Mulvey, Christine Martineau, Simon Lévesque, Sadjia Bekal, Marc-Christian Domingo, Florence Doualla-Bell, Jean Longtin, Brigitte Lefebvre

published 13 Dec 2017

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Bioinformatic analysis reveals new determinants of antigenic 14-3-3 proteins and a novel antifungal strategy

Jenna E. McGowan, Jacqueline Kratch, Saurabh Chattopadhyay, Bina Joe, Heather R. Conti, Ritu Chakravarti

published 12 Dec 2017

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Identification, expression and functional characterization of M₄L, a muscarinic acetylcholine M₄ receptor splice variant

Douglas A. Schober, Carrie H. Croy, Cara L. Ruble, Ran Tao, Christian C. Felder

published 06 Dec 2017

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Characterization of dFOXO binding sites upstream of the Insulin Receptor P2 promoter across the Drosophila phylogeny

Dorcas J. Orengo, Montserrat Aguadé, Elvira Juan

published 04 Dec 2017

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Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design

Jennifer Cassidy, Larah Bruen, Elena Rosini, Gianluca Molla, Loredano Pollegioni, Francesca Paradisi

published 30 Nov 2017

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Genetic signatures for Helicobacter pylori strains of West African origin

Kennady K. Bullock, Carrie L. Shaffer, Andrew W. Brooks, Ousman Secka, Mark H. Forsyth, Mark S. McClain, Timothy L. Cover

published 29 Nov 2017

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Ultraconserved elements (UCEs) resolve the phylogeny of Australasian smurf-weevils

Matthew H. Van Dam, Athena W. Lam, Katayo Sagata, Bradley Gewa, Raymond Laufa, Michael Balke, Brant C. Faircloth, Alexander Riedel

published 22 Nov 2017

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Mitochondrial DNA sequence context in the penetrance of mitochondrial t-RNA mutations: A study across multiple lineages with diagnostic implications

Rachel A. Queen, Jannetta S. Steyn, Phillip Lord, Joanna L. Elson

published 21 Nov 2017

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Unusual occurrence of a DAG motif in the Ipomovirus Cassava brown streak virus and implications for its vector transmission

Elijah Ateka, Titus Alicai, Joseph Ndunguru, Fred Tairo, Peter Sseruwagi, Samuel Kiarie, Timothy Makori, Monica A. Kehoe, Laura M. Boykin

published 20 Nov 2017

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Independent degradation in genes of the plastid ndh gene family in species of the orchid genus Cymbidium (Orchidaceae; Epidendroideae)

Hyoung Tae Kim, Mark W. Chase

published 15 Nov 2017

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