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Sequence alignment

Molecular characterization of porcine epidemic diarrhoea virus (PEDV) in Poland reveals the presence of swine enteric coronavirus (SeCoV) sequence in S gene

Marta Antas, Monika Olech, Anna Szczotka-Bochniarz

published 29 Oct 2021

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A bioinformatics pipeline for Mycobacterium tuberculosis sequencing that cleans contaminant reads from sputum samples

Betzaida Cuevas-Córdoba, Cristóbal Fresno, Joshua I. Haase-Hernández, Martín Barbosa-Amezcua, Minerva Mata-Rocha, Marcela Muñoz-Torrico, Miguel A. Salazar-Lezama, José A. Martínez-Orozco, Luis A. Narváez-Díaz, Jorge Salas-Hernández, Vanessa González-Covarrubias, Xavier Soberón

published 26 Oct 2021

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The GH19 Engineering Database: Sequence diversity, substrate scope, and evolution in glycoside hydrolase family 19

Marco Orlando, Patrick C. F. Buchholz, Marina Lotti, Jürgen Pleiss

published 26 Oct 2021

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Single nucleotide polymorphisms and copy-number variations in the Trypanosoma brucei repeat (TBR) sequence can be used to enhance amplification and genotyping of Trypanozoon strains

Nick Van Reet, Pati Patient Pyana, Sara Dehou, Nicolas Bebronne, Stijn Deborggraeve, Philippe Büscher

published 25 Oct 2021

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Comprehensive mutagenesis to identify amino acid residues contributing to the difference in thermostability between two originally thermostable ancestral proteins

Satoshi Akanuma, Minako Yamaguchi, Akihiko Yamagishi

published 21 Oct 2021

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Expanding the clinical phenotype associated with NIPAL4 mutation: Study of a Tunisian consanguineous family with erythrokeratodermia variabilis—Like Autosomal Recessive Congenital Ichthyosis

Cherine Charfeddine, Nadia Laroussi, Rahma Mkaouar, Raja Jouini, Olfa Khayat, Aladin Redissi, Amor Mosbah, Hamza Dallali, Achraf Chedly Debbiche, Anissa Zaouak, Sami Fenniche, Sonia Abdelhak, Houda Hammami-Ghorbel

published 20 Oct 2021

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Predicting drug targets by homology modelling of Pseudomonas aeruginosa proteins of unknown function

Nikolina Babic, Filip Kovacic

published 14 Oct 2021

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Correspondence of aCGH and long-read genome assembly for detection of copy number differences: A proof-of-concept with cichlid genomes

Gabriel A. Preising, Joshua J. Faber-Hammond, Suzy C. P. Renn

published 07 Oct 2021

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easyFulcrum: An R package to process and analyze ecological sampling data generated using the Fulcrum mobile application

Matteo Di Bernardo, Timothy A. Crombie, Daniel E. Cook, Erik C. Andersen

published 06 Oct 2021

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Sequence and structure comparison of ATP synthase F₀ subunits 6 and 8 in notothenioid fish

Gunjan Katyal, Brad Ebanks, Magnus Lucassen, Chiara Papetti, Lisa Chakrabarti

published 06 Oct 2021

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Sequencing DNA with nanopores: Troubles and biases

Clara Delahaye, Jacques Nicolas

published 01 Oct 2021

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Signal-based optical map alignment

Mehmet Akdel, Henri van de Geest, Elio Schijlen, Irma M. H. van Rijswijck, Eddy J. Smid, Gabino Sanchez-Perez, Dick de Ridder

published 30 Sep 2021

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Identification of pathogenic Leptospira species and serovars in New Zealand using metabarcoding

David A. Wilkinson, Matthew Edwards, Jackie Benschop, Shahista Nisa

published 29 Sep 2021

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