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Sequence alignment

CView: A network based tool for enhanced alignment visualization

Raquel Linheiro, Stephen Sabatino, Diana Lobo, John Archer

published 13 Jun 2022

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The extant immunoglobulin superfamily, member 1 gene results from an ancestral gene duplication in eutherian mammals

Courtney L. Smith, Paul M. Harrison, Daniel J. Bernard

published 02 Jun 2022

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MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

Jidong Lang

published 20 May 2022

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An ancestral genomic sequence that serves as a nucleation site for de novo gene birth

Nicholas Delihas

published 12 May 2022

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High quality genome annotation and expression visualisation of a mupirocin-producing bacterium

Anthony S. Haines, Steve G. Kendrew, Nicola Crowhurst, Elton R. Stephens, Jack Connolly, Joanne Hothersall, Claire E. Miller, Andrew J. Collis, Benjamin D. Huckle, Christopher M. Thomas

published 05 May 2022

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Functional analysis of LFRFamide signaling in Pacific abalone, Haliotis discus hannai

Sungwoo Yoon, Mi Ae Kim, Jung Sick Lee, Young Chang Sohn

published 05 May 2022

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Functional exploration of the glycoside hydrolase family GH113

Marie Couturier, Mélanie Touvrey-Loiodice, Nicolas Terrapon, Elodie Drula, Laurine Buon, Christine Chirat, Bernard Henrissat, William Helbert

published 22 Apr 2022

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CHAPAO: Likelihood and hierarchical reference-based representation of biomolecular sequences and applications to compressing multiple sequence alignments

Md Ashiqur Rahman, Abdullah Aman Tutul, Sifat Muhammad Abdullah, Md. Shamsuzzoha Bayzid

published 18 Apr 2022

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WalkIm: Compact image-based encoding for high-performance classification of biological sequences using simple tuning-free CNNs

Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi

published 15 Apr 2022

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Comparative analysis of the complete plastid genomes in Prunus subgenus Cerasus (Rosaceae): Molecular structures and phylogenetic relationships

Meng Li, Yan-Feng Song, Steven P. Sylvester, Steven P. Sylvester, Xian-Rong Wang

published 06 Apr 2022

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Phylogenetic analysis of 17271 Indian SARS-CoV-2 genomes to identify temporal and spatial hotspot mutations

Nimisha Ghosh, Suman Nandi, Indrajit Saha

published 28 Mar 2022

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New plastomes of eight Ipomoea species and four putative hybrids from Eastern Amazon

Marcele Laux, Renato R. M. Oliveira, Santelmo Vasconcelos, Eder S. Pires, Talvâne G. L. Lima, Mayara Pastore, Gisele L. Nunes, Ronnie Alves, Guilherme Oliveira

published 17 Mar 2022

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Comparative analysis of alignment-free genome clustering and whole genome alignment-based phylogenomic relationship of coronaviruses

Anastasiya D. Kirichenko, Anastasiya A. Poroshina, Dmitry Yu. Sherbakov, Michael G. Sadovsky, Konstantin V. Krutovsky

published 08 Mar 2022

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