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Sequence alignment

Estimation of Isolation Times of the Island Species in the Drosophila simulans Complex from Multilocus DNA Sequence Data

Shannon R. McDermott, Richard M. Kliman

MemBrain: Improving the Accuracy of Predicting Transmembrane Helices

Hongbin Shen, James J. Chou

Pattern of the Divergence of Olfactory Receptor Genes during Tetrapod Evolution

Takushi Kishida

SP⁵: Improving Protein Fold Recognition by Using Torsion Angle Profiles and Profile-Based Gap Penalty Model

Wei Zhang, Song Liu, Yaoqi Zhou

Analysis of the EIAV Rev-Responsive Element (RRE) Reveals a Conserved RNA Motif Required for High Affinity Rev Binding in Both HIV-1 and EIAV

Jae-Hyung Lee, Gloria Culver, Susan Carpenter, Drena Dobbs

Highly Conserved Regimes of Neighbor-Base-Dependent Mutation Generated the Background Primary-Structural Heterogeneities along Vertebrate Chromosomes

Marcos A. Antezana, I. King Jordan

The Nod-Like Receptor (NLR) Family: A Tale of Similarities and Differences

Martina Proell, Stefan J. Riedl, [ ... ], Robert Schwarzenbacher

Characterization of Clinically-Attenuated Burkholderia mallei by Whole Genome Sequencing: Candidate Strain for Exclusion from Select Agent Lists

Steven E. Schutzer, Linda R. K. Schlater, [ ... ], William C. Nierman

Evidence for the Intense Exchange of MazG in Marine Cyanophages by Horizontal Gene Transfer

Michael J. Bryan, Nigel J. Burroughs, [ ... ], Samantha J. Bryan

Nature of Protein Family Signatures: Insights from Singular Value Analysis of Position-Specific Scoring Matrices

Akira R. Kinjo, Haruki Nakamura

Alignment of Non-Covalent Interactions at Protein-Protein Interfaces

Hongbo Zhu, Ingolf Sommer, Thomas Lengauer, Francisco S. Domingues

Distinguishing Molecular Features and Clinical Characteristics of a Putative New Rhinovirus Species, Human Rhinovirus C (HRV C)

Peter McErlean, Laura A. Shackelton, [ ... ], Ian M. Mackay

Improving Phrap-Based Assembly of the Rat Using “Reliable” Overlaps

Michael Roberts, Aleksey V. Zimin, [ ... ], James Yorke

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