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Sequence alignment

Computational Analysis and Experimental Validation of Gene Predictions in Toxoplasma gondii

Joseph M. Dybas, Carlos J. Madrid-Aliste, [ ... ], Andras Fiser

Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse Brain

Xu Wang, Qi Sun, [ ... ], Andrew G. Clark

Acquisition and Evolution of Plant Pathogenesis–Associated Gene Clusters and Candidate Determinants of Tissue-Specificity in Xanthomonas

Hong Lu, Prabhu Patil, [ ... ], Adam J. Bogdanove

Detecting Clusters of Mutations

Tong Zhou, Peter J. Enyeart, Claus O. Wilke

Evolutionary Patterning: A Novel Approach to the Identification of Potential Drug Target Sites in Plasmodium falciparum

Pierre M. Durand, Kubendran Naidoo, Theresa L. Coetzer

Genomic Convergence Analysis of Schizophrenia: mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum

Joann Mudge, Neil A. Miller, [ ... ], Stephen F. Kingsmore

FastBLAST: Homology Relationships for Millions of Proteins

Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin

A Computational Screen for Type I Polyketide Synthases in Metagenomics Shotgun Data

Konrad U. Foerstner, Tobias Doerks, [ ... ], Peer Bork

Prediction of Extracellular Proteases of the Human Pathogen Helicobacter pylori Reveals Proteolytic Activity of the Hp1018/19 Protein HtrA

Martin Löwer, Christiane Weydig, [ ... ], Gisbert Schneider

Species Specificity in Major Urinary Proteins by Parallel Evolution

Darren W. Logan, Tobias F. Marton, Lisa Stowers

On Evaluating MHC-II Binding Peptide Prediction Methods

Yasser EL-Manzalawy, Drena Dobbs, Vasant Honavar

Genetic Analysis of HIV-1 Subtypes in Nairobi, Kenya

Suhail Khoja, Peter Ojwang, [ ... ], Syed Ali

Horizontal Gene Transfers Link a Human MRSA Pathogen to Contagious Bovine Mastitis Bacteria

Thomas Brody, Amarendra S. Yavatkar, [ ... ], Ward F. Odenwald

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