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Sequence alignment

A Method for the Simultaneous Estimation of Selection Intensities in Overlapping Genes

Niv Sabath, Giddy Landan, Dan Graur

Ultraconserved Elements in the Olig2 Promoter

Christina T. L. Chen, David I. Gottlieb, Barak A. Cohen

UPF201 Archaeal Specific Family Members Reveal Structural Similarity to RNA-Binding Proteins but Low Likelihood for RNA-Binding Function

Krishnamurthy N. Rao, Stephen K. Burley, Subramanyam Swaminathan

Computational Analysis and Experimental Validation of Gene Predictions in Toxoplasma gondii

Joseph M. Dybas, Carlos J. Madrid-Aliste, [ ... ], Andras Fiser

Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse Brain

Xu Wang, Qi Sun, [ ... ], Andrew G. Clark

Acquisition and Evolution of Plant Pathogenesis–Associated Gene Clusters and Candidate Determinants of Tissue-Specificity in Xanthomonas

Hong Lu, Prabhu Patil, [ ... ], Adam J. Bogdanove

Detecting Clusters of Mutations

Tong Zhou, Peter J. Enyeart, Claus O. Wilke

Evolutionary Patterning: A Novel Approach to the Identification of Potential Drug Target Sites in Plasmodium falciparum

Pierre M. Durand, Kubendran Naidoo, Theresa L. Coetzer

Genomic Convergence Analysis of Schizophrenia: mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum

Joann Mudge, Neil A. Miller, [ ... ], Stephen F. Kingsmore

FastBLAST: Homology Relationships for Millions of Proteins

Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin

A Computational Screen for Type I Polyketide Synthases in Metagenomics Shotgun Data

Konrad U. Foerstner, Tobias Doerks, [ ... ], Peer Bork

Prediction of Extracellular Proteases of the Human Pathogen Helicobacter pylori Reveals Proteolytic Activity of the Hp1018/19 Protein HtrA

Martin Löwer, Christiane Weydig, [ ... ], Gisbert Schneider

Species Specificity in Major Urinary Proteins by Parallel Evolution

Darren W. Logan, Tobias F. Marton, Lisa Stowers

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