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Sequence alignment

Sequence and Structural Analysis of the Chitinase Insertion Domain Reveals Two Conserved Motifs Involved in Chitin-Binding

Hai Li, Lesley H. Greene

Rapid Genomic Characterization of the Genus Vitis

Sean Myles, Jer-Ming Chia, [ ... ], Doreen Ware

Structural and Functional Roles of Coevolved Sites in Proteins

Saikat Chakrabarti, Anna R. Panchenko

Extraordinary Molecular Evolution in the PRDM9 Fertility Gene

James H. Thomas, Ryan O. Emerson, Jay Shendure

Contrasting Patterns of Transposable Element Insertions in Drosophila Heat-Shock Promoters

Robert A. Haney, Martin E. Feder

Proteomic Detection of Non-Annotated Protein-Coding Genes in Pseudomonas fluorescens Pf0-1

Wook Kim, Mark W. Silby, [ ... ], Stuart B. Levy

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

Molecular Evolution of Drosophila Cuticular Protein Genes

R. Scott Cornman

A High-Throughput DNA Sequence Aligner for Microbial Ecology Studies

Patrick D. Schloss

PALM: A Paralleled and Integrated Framework for Phylogenetic Inference with Automatic Likelihood Model Selectors

Shu-Hwa Chen, Sheng-Yao Su, [ ... ], Chung-Yen Lin

Effective Identification of Conserved Pathways in Biological Networks Using Hidden Markov Models

Xiaoning Qian, Byung-Jun Yoon

Characterization of Genes Encoding Poly(A) Polymerases in Plants: Evidence for Duplication and Functional Specialization

Lisa R. Meeks, Balasubrahmanyam Addepalli, Arthur G. Hunt

Stem Loop Sequences Specific to Transposable Element IS605 Are Found Linked to Lipoprotein Genes in Borrelia Plasmids

Nicholas Delihas

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